54 lines
2.6 KiB
Plaintext
54 lines
2.6 KiB
Plaintext
AtomicList Lists of Atomic Vectors in Natural and Rle Form
|
|
AtomicList-utils Common operations on AtomicList objects
|
|
CompressedHitsList-class
|
|
CompressedHitsList objects
|
|
CompressedList-class CompressedList objects
|
|
DataFrameList-class List of DataFrames
|
|
Grouping-class Grouping objects
|
|
Hits-examples Examples of basic manipulation of Hits objects
|
|
IPos-class IPos objects
|
|
IPosRanges-class IPosRanges objects
|
|
IPosRanges-comparison Comparing and ordering ranges
|
|
IRanges-class IRanges and NormalIRanges objects
|
|
IRanges-constructor The IRanges constructor and supporting
|
|
functions
|
|
IRanges-utils IRanges utility functions
|
|
IRangesList-class List of IRanges and NormalIRanges
|
|
IntegerRanges-class IntegerRanges objects
|
|
IntegerRangesList-class
|
|
IntegerRangesList objects
|
|
MaskCollection-class MaskCollection objects
|
|
NCList-class Nested Containment List objects
|
|
RangedSelection-class Selection of ranges and columns
|
|
RleViews-class The RleViews class
|
|
RleViewsList-class List of RleViews
|
|
Views-class Views objects
|
|
ViewsList-class List of Views
|
|
coverage-methods Coverage of a set of ranges
|
|
extractList Group elements of a vector-like object into a
|
|
list-like object
|
|
extractListFragments Extract list fragments from a list-like object
|
|
findOverlaps-methods Finding overlapping ranges
|
|
inter-range-methods Inter range transformations of an
|
|
IntegerRanges, Views, IntegerRangesList, or
|
|
MaskCollection object
|
|
intra-range-methods Intra range transformations of an IRanges,
|
|
IPos, Views, RangesList, or MaskCollection
|
|
object
|
|
multisplit Split elements belonging to multiple groups
|
|
nearest-methods Finding the nearest range/position neighbor
|
|
range-squeezers Squeeze the ranges out of a range-based object
|
|
ranges,Rle-method Rle objects (old man page)
|
|
read.Mask Read a mask from a file
|
|
reverse reverse
|
|
setops-methods Set operations on IntegerRanges and
|
|
IntegerRangesList objects
|
|
slice-methods Slice a vector-like or list-like object
|
|
unsplit,List-method 2 methods that should be documented somewhere
|
|
else
|
|
view-summarization-methods
|
|
Summarize views on a vector-like object with
|
|
numeric values
|
|
window<-,Vector-method
|
|
Vector objects (old man page)
|