557 lines
13 KiB
Plaintext
557 lines
13 KiB
Plaintext
vegan-package vegan-package
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add1.cca add1.cca
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addCailliez vegan-internal
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addLingoes vegan-internal
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adipart adipart
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adipart.default adipart
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adipart.formula adipart
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adonis vegan-deprecated
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adonis2 adonis
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AIC.fitspecaccum specaccum
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AIC.radfit radfit
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AIC.radfit.frame radfit
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alias.cca goodness.cca
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anosim anosim
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anova.betadisper betadisper
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anova.cca anova.cca
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as.fisher fisherfit
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as.hclust.spantree spantree
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as.mcmc.oecosimu vegan-deprecated
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as.mcmc.permat vegan-deprecated
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as.mlm vegan-defunct
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as.mlm.cca vegan-defunct
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as.mlm.rda vegan-defunct
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as.preston fisherfit
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as.rad radfit
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as.ts.oecosimu oecosimu
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as.ts.permat permatfull
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avgdist avgdist
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BCI BCI
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BCI.env BCI
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beals beals
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betadisper betadisper
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betadiver betadiver
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bgdispersal bgdispersal
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bioenv bioenv
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bioenv.default bioenv
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bioenv.formula bioenv
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bioenvdist bioenv
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biplot.cca biplot.rda
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biplot.CCorA CCorA
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biplot.rda biplot.rda
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boxplot.betadisper betadisper
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boxplot.permustats permustats
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boxplot.specaccum specaccum
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bstick screeplot.cca
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bstick.cca screeplot.cca
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bstick.decorana screeplot.cca
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bstick.default screeplot.cca
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bstick.prcomp screeplot.cca
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bstick.princomp screeplot.cca
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c.permustats permustats
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ca cca
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calibrate predict.cca
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calibrate.cca predict.cca
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calibrate.ordisurf ordisurf
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capscale dbrda
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cascadeKM cascadeKM
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cca cca
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cca.default cca
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cca.formula cca
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cca.object cca.object
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CCorA CCorA
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centroids.cca vegan-internal
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chaodist designdist
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cIndexKM cascadeKM
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clamtest clamtest
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coef.cca predict.cca
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coef.radfit radfit
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coef.radfit.frame radfit
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coef.rda predict.cca
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commsim commsim
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commsimulator vegan-defunct
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confint.MOStest MOStest
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contribdiv contribdiv
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cooks.distance.cca influence.cca
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cophenetic.spantree spantree
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coverscale vegemite
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cutreeord reorder.hclust
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dbrda dbrda
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decobackstand decostand
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decorana decorana
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decostand decostand
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density.adonis vegan-defunct
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density.anosim vegan-defunct
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density.mantel vegan-defunct
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density.mrpp vegan-defunct
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density.oecosimu vegan-defunct
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density.permustats permustats
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density.permutest.cca vegan-defunct
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density.protest vegan-defunct
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densityplot.adonis vegan-defunct
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densityplot.oecosimu vegan-defunct
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densityplot.permustats permustats
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designdist designdist
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deviance.cca deviance.cca
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deviance.fitspecaccum specaccum
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deviance.radfit radfit
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deviance.radfit.frame radfit
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deviance.rda deviance.cca
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df.residual.cca influence.cca
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dispindmorisita dispindmorisita
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dispweight dispweight
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distconnected distconnected
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diversity diversity
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downweight decorana
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drarefy rarefy
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drop1.cca add1.cca
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dune dune
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dune.env dune
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dune.phylodis dune.taxon
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dune.taxon dune.taxon
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eigengrad wascores
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eigenvals eigenvals
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eigenvals.betadisper betadisper
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eigenvals.cca eigenvals
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eigenvals.decorana eigenvals
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eigenvals.default eigenvals
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eigenvals.dudi eigenvals
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eigenvals.pca eigenvals
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eigenvals.pcnm eigenvals
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eigenvals.pco eigenvals
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eigenvals.prcomp eigenvals
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eigenvals.princomp eigenvals
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eigenvals.wcmdscale eigenvals
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envfit envfit
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envfit.default envfit
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envfit.formula envfit
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estaccumR specpool
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estimateR specpool
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estimateR.data.frame specpool
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estimateR.default specpool
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estimateR.matrix specpool
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eventstar eventstar
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extractAIC.cca deviance.cca
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factorfit envfit
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fieller.MOStest MOStest
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fisher.alpha diversity
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fisherfit fisherfit
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fitspecaccum specaccum
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fitted.capscale predict.cca
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fitted.cca predict.cca
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fitted.dbrda predict.cca
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fitted.procrustes procrustes
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fitted.radfit radfit
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fitted.radfit.frame radfit
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fitted.rda predict.cca
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gdispweight dispweight
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getNumObs vegan-defunct
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getPermuteMatrix vegan-internal
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goodness goodness.cca
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goodness.cca goodness.cca
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goodness.metaMDS goodness.metaMDS
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goodness.monoMDS goodness.metaMDS
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GowerDblcen vegan-internal
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hatvalues.cca influence.cca
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hatvalues.rda influence.cca
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hierParseFormula vegan-internal
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hiersimu adipart
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hiersimu.default adipart
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hiersimu.formula adipart
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howHead vegan-internal
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humpfit vegan-defunct
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identify.ordiplot ordiplot
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indpower indpower
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inertcomp goodness.cca
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initMDS metaMDS
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intersetcor goodness.cca
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isomap isomap
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isomapdist isomap
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kendall.global kendall.global
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kendall.post kendall.global
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labels.cca plot.cca
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labels.envfit envfit
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lines.fitspecaccum specaccum
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lines.permat permatfull
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lines.preston fisherfit
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lines.prestonfit fisherfit
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lines.procrustes procrustes
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lines.radfit radfit
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lines.radline radfit
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lines.spantree spantree
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lines.specaccum specaccum
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linestack linestack
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logLik, radfit radfit
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logLik, radfit.frame radfit
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logLik.fitspecaccum specaccum
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make.cepnames make.cepnames
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make.commsim commsim
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mantel mantel
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mantel.correlog mantel.correlog
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mantel.partial mantel
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MDSrotate MDSrotate
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meandist mrpp
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metaMDS metaMDS
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metaMDSdist metaMDS
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metaMDSiter metaMDS
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metaMDSredist metaMDS
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metaMDSrotate vegan-defunct
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mite mite
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mite.env mite
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mite.pcnm mite
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mite.xy mite
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model.frame.cca cca.object
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model.matrix.cca cca.object
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model.matrix.rda cca.object
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monoMDS monoMDS
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MOStest MOStest
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mrpp mrpp
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mso mso
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msoplot mso
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multipart multipart
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multipart.default multipart
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multipart.formula multipart
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nestedbetajac nestedtemp
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nestedbetasor nestedtemp
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nestedchecker nestedtemp
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nesteddisc nestedtemp
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nestedn0 nestedtemp
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nestednodf nestedtemp
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nestedtemp nestedtemp
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no.shared distconnected
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nobs.betadisper nobs.cca
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nobs.cca nobs.cca
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nobs.CCorA nobs.cca
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nobs.decorana nobs.cca
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nobs.fitspecaccum specaccum
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nobs.isomap nobs.cca
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nobs.metaMDS nobs.cca
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nobs.pcnm nobs.cca
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nobs.procrustes nobs.cca
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nobs.rad nobs.cca
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nobs.varpart nobs.cca
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nobs.wcmdscale nobs.cca
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nullmodel nullmodel
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oecosimu oecosimu
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ordConstrained cca.object
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orderingKM cascadeKM
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ordiareatest ordihull
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ordiArgAbsorber vegan-internal
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ordiArrowMul ordiArrowTextXY
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ordiarrows ordiarrows
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ordiArrowTextXY ordiArrowTextXY
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ordibar ordihull
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ordicloud ordixyplot
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ordicluster ordihull
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ordiellipse ordihull
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ordigrid ordiarrows
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ordihull ordihull
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ordilabel ordilabel
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ordilattice.getEnvfit ordixyplot
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ordimedian betadisper
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ordiNAexclude vegan-internal
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ordiNApredict vegan-internal
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ordiParseFormula vegan-internal
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ordiplot ordiplot
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ordipointlabel ordipointlabel
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ordiR2step ordistep
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ordiresids ordiresids
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ordisegments ordiarrows
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ordispider ordihull
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ordisplom ordixyplot
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ordistep ordistep
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ordisurf ordisurf
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ordisurf.default ordisurf
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ordisurf.formula ordisurf
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ordiTerminfo vegan-internal
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orditkplot vegan-deprecated
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orditorp orditorp
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ordixyplot ordixyplot
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ordiYbar cca.object
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pairs.permustats permustats
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panel.ordi ordixyplot
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panel.ordi3d ordixyplot
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panel.ordiarrows ordixyplot
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pasteCall vegan-internal
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pca cca
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pcnm pcnm
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pco dbrda
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permatfull permatfull
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permatswap permatfull
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permustats permustats
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permustats.anosim permustats
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permustats.anova.cca permustats
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permustats.CCorA permustats
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permustats.envfit permustats
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permustats.factorfit permustats
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permustats.mantel permustats
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permustats.mrpp permustats
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permustats.mso permustats
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permustats.oecosimu permustats
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permustats.ordiareatest permustats
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permustats.permutest.betadisper permustats
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permustats.permutest.cca permustats
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permustats.protest permustats
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permustats.vectorfit permustats
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permutations permutations
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permuted.index vegan-defunct
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permuted.index2 vegan-defunct
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permutest anova.cca
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permutest.betadisper permutest.betadisper
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permutest.cca anova.cca
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persp.renyiaccum renyi
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persp.tsallisaccum tsallis
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plot.anosim anosim
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plot.betadisper betadisper
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plot.betadiver betadiver
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plot.cascadeKM cascadeKM
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plot.cca plot.cca
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plot.clamtest clamtest
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plot.contribdiv contribdiv
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plot.decorana decorana
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plot.envfit envfit
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plot.fisher fisherfit
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plot.fisherfit fisherfit
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plot.fitspecaccum specaccum
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plot.isomap isomap
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plot.mantel.correlog mantel.correlog
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plot.meandist mrpp
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plot.metaMDS metaMDS
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plot.monoMDS monoMDS
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plot.MOStest MOStest
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plot.nestednodf nestedtemp
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plot.nestedtemp nestedtemp
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plot.ordipointlabel ordipointlabel
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plot.ordisurf ordisurf
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plot.orditkplot vegan-deprecated
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plot.permat permatfull
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plot.poolaccum specpool
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plot.prc prc
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plot.preston fisherfit
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plot.prestonfit fisherfit
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plot.procrustes procrustes
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plot.rad radfit
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plot.radfit radfit
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plot.radfit.frame radfit
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plot.radline radfit
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plot.renyi renyi
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plot.renyiaccum renyi
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plot.spantree spantree
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plot.specaccum specaccum
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plot.taxondive taxondive
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plot.varpart varpart
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plot.varpart234 varpart
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plot.vegandensity vegan-defunct
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plot.wcmdscale wcmdscale
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points.cca plot.cca
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points.decorana decorana
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points.metaMDS metaMDS
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points.monoMDS monoMDS
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points.ordiplot ordiplot
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points.orditkplot vegan-deprecated
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points.procrustes procrustes
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points.radfit radfit
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points.radline radfit
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poolaccum specpool
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postMDS metaMDS
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prc prc
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predict.cca predict.cca
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predict.dbrda predict.cca
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predict.decorana predict.cca
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predict.fitspecaccum specaccum
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predict.procrustes procrustes
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predict.radfit radfit
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predict.radfit.frame radfit
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predict.radline radfit
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predict.rda predict.cca
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predict.specaccum specaccum
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pregraphKM cascadeKM
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prepanel.ordi3d ordixyplot
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prestondistr fisherfit
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prestonfit fisherfit
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print.betadisper betadisper
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print.cca cca.object
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print.commsim commsim
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print.nullmodel nullmodel
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print.permat permatfull
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print.simmat nullmodel
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print.specaccum specaccum
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print.summary.cca plot.cca
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print.summary.decorana decorana
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print.summary.permat permatfull
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procrustes procrustes
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profile.MOStest MOStest
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protest procrustes
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pyrifos pyrifos
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qqmath.permustats permustats
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qqnorm.permustats permustats
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qr.cca influence.cca
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rad.lognormal radfit
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rad.null radfit
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rad.preempt radfit
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rad.zipf radfit
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rad.zipfbrot radfit
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radfit radfit
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radfit.data.frame radfit
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radfit.default radfit
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radlattice radfit
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rankindex rankindex
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rarecurve rarefy
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rarefy rarefy
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rareslope rarefy
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raupcrick raupcrick
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rda cca
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rda.default cca
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rda.formula cca
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read.cep read.cep
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renyi renyi
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renyiaccum renyi
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reorder.hclust reorder.hclust
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residuals.cca predict.cca
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residuals.procrustes procrustes
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rev.hclust reorder.hclust
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rrarefy rarefy
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RsquareAdj RsquareAdj
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RsquareAdj.cca RsquareAdj
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RsquareAdj.default RsquareAdj
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RsquareAdj.glm RsquareAdj
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RsquareAdj.lm RsquareAdj
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RsquareAdj.rda RsquareAdj
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rstandard.cca influence.cca
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rstudent.cca influence.cca
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scores scores
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scores.betadisper betadisper
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scores.betadiver betadiver
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scores.cca plot.cca
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scores.decorana decorana
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scores.default scores
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scores.envfit envfit
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scores.hclust reorder.hclust
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scores.lda scores
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scores.metaMDS metaMDS
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scores.monoMDS monoMDS
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scores.ordihull ordihull
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scores.ordiplot ordiplot
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scores.orditkplot vegan-deprecated
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scores.pcnm pcnm
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scores.rda plot.cca
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scores.wcmdscale wcmdscale
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screeplot.cca screeplot.cca
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screeplot.decorana screeplot.cca
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screeplot.prcomp screeplot.cca
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screeplot.princomp screeplot.cca
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showvarparts varpart
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sigma.cca influence.cca
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simmat nullmodel
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simper simper
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simpleDBRDA varpart
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simpleRDA2 varpart
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simpson.unb diversity
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simulate.capscale simulate.rda
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simulate.cca simulate.rda
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simulate.nullmodel nullmodel
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simulate.rda simulate.rda
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sipoo sipoo
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sipoo.map sipoo
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smbind nullmodel
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spandepth spantree
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spantree spantree
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specaccum specaccum
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specnumber diversity
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specpool specpool
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specpool2vect specpool
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specslope specaccum
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spenvcor goodness.cca
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sppscores sppscores
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sppscores<- sppscores
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sppscores<-.capscale sppscores
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sppscores<-.dbrda sppscores
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sppscores<-.metaMDS sppscores
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SSarrhenius SSarrhenius
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SSD.cca influence.cca
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SSgitay SSarrhenius
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SSgleason SSarrhenius
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SSlomolino SSarrhenius
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stepacross stepacross
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str.nullmodel nullmodel
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stressplot goodness.metaMDS
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stressplot.capscale stressplot.wcmdscale
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stressplot.cca stressplot.wcmdscale
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stressplot.dbrda stressplot.wcmdscale
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stressplot.default goodness.metaMDS
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stressplot.monoMDS goodness.metaMDS
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stressplot.prcomp stressplot.wcmdscale
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stressplot.princomp stressplot.wcmdscale
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stressplot.rda stressplot.wcmdscale
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stressplot.wcmdscale stressplot.wcmdscale
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summary.anosim anosim
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summary.bioenv bioenv
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summary.cca plot.cca
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summary.clamtest clamtest
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summary.decorana decorana
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summary.dispweight dispweight
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summary.eigenvals eigenvals
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summary.isomap isomap
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summary.meandist mrpp
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summary.ordiellipse ordihull
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summary.ordihull ordihull
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summary.permat permatfull
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summary.permustats permustats
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summary.poolaccum specpool
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summary.prc prc
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summary.procrustes procrustes
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summary.radfit.frame radfit
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summary.simper simper
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summary.specaccum specaccum
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summary.taxondive taxondive
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summary.varpart varpart
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swan beals
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tabasco vegemite
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taxa2dist taxondive
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taxondive taxondive
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text.cca plot.cca
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text.decorana decorana
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text.metaMDS metaMDS
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text.monoMDS monoMDS
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text.ordiplot ordiplot
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text.orditkplot vegan-deprecated
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text.procrustes procrustes
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toCoda oecosimu
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toCoda.oecosimu oecosimu
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toCoda.permat permatfull
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tolerance tolerance
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tolerance.cca tolerance
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tolerance.decorana tolerance
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treedist treedive
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treedive treedive
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treeheight treedive
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tsallis tsallis
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tsallisaccum tsallis
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TukeyHSD.betadisper betadisper
|
|
update.nullmodel nullmodel
|
|
varechem varechem
|
|
varespec varechem
|
|
varpart varpart
|
|
varpart2 varpart
|
|
varpart3 varpart
|
|
varpart4 varpart
|
|
vcov.cca influence.cca
|
|
vectorfit envfit
|
|
vegan vegan-package
|
|
vegan-defunct vegan-defunct
|
|
vegan-deprecated vegan-deprecated
|
|
vegan-internal vegan-internal
|
|
veganCovEllipse vegan-internal
|
|
vegandocs vegan-defunct
|
|
veganMahatrans vegan-internal
|
|
vegdist vegdist
|
|
vegemite vegemite
|
|
veiledspec fisherfit
|
|
vif.cca goodness.cca
|
|
wascores wascores
|
|
wcmdscale wcmdscale
|
|
weights.cca cca.object
|
|
weights.decorana cca.object
|
|
weights.rda cca.object
|
|
wisconsin decostand
|