115 lines
5.7 KiB
Plaintext
115 lines
5.7 KiB
Plaintext
Package: dendextend
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Type: Package
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Title: Extending 'dendrogram' Functionality in R
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Version: 1.19.0
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Date: 2024-11-15
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Authors@R: c(person("Tal", "Galili", role = c("aut", "cre", "cph"), email =
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"tal.galili@gmail.com", comment = "https://www.r-statistics.com"),
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person("Yoav", "Benjamini", email = "ybenja@tau.ac.il",role = "ths"),
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person("Gavin", "Simpson", role = "ctb"), person("Gregory","Jefferis", role
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= c("aut", "ctb"), email = "jefferis@gmail.com",
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comment ="imported code from his dendroextras package"),
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person("Marco", "Gallotta", role = "ctb", comment =
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"a.k.a: marcog") , person("Johan", "Renaudie", role = "ctb", comment =
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"https://github.com/plannapus"), person("The R Core Team", role = "ctb",
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comment = "Thanks for the Infastructure, and code in the examples"),
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person("Kurt", "Hornik", role = "ctb"), person("Uwe", "Ligges",
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role = "ctb"), person("Andrej-Nikolai", "Spiess", role = "ctb"),
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person("Steve", "Horvath",email = "SHorvath@mednet.ucla.edu", role =
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"ctb"), person("Peter", "Langfelder",email = "Peter.Langfelder@gmail.com",
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role = "ctb"), person("skullkey", role = "ctb"), person("Mark",
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"Van Der Loo", email = "mark.vanderloo@gmail.com", comment =
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"https://github.com/markvanderloo d3dendrogram", role = "ctb"),
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person("Andrie",
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"de Vries", email = "apdevries@gmail.com", comment =
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"ggdendro author", role = "ctb"),
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person("Zuguang",
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"Gu", email = "z.gu@dkfz-heidelberg.de", comment =
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"circlize author", role = "ctb"),
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person("Cath", comment =
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"https://github.com/CathG", role = "ctb"), person("John",
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"Ma", comment =
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"https://github.com/JohnMCMa", role = "ctb"), person("Krzysiek",
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"G", comment =
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"https://github.com/storaged", role = "ctb"), person("Manuela",
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"Hummel", email = "m.hummel@dkfz.de", comment =
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"https://github.com/hummelma", role = "ctb"),
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person("Chase",
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"Clark", comment =
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"https://github.com/chasemc", role = "ctb"),
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person("Lucas",
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"Graybuck", comment =
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"https://github.com/hypercompetent", role = "ctb"),
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person("jdetribol", comment =
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"https://github.com/jdetribol", role = "ctb"),
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person("Ben", "Ho", role = "ctb", email = "ben.ho@sickkids.ca", comment = "https://github.com/SplitInf"),
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person("Samuel", "Perreault", role = "ctb", email = "samuel.perreault.3@ulaval.ca", comment = "https://github.com/samperochkin"),
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person("Christian", "Hennig", role = "ctb", email = "c.hennig@ucl.ac.uk", comment = "http://www.homepages.ucl.ac.uk/~ucakche/"),
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person("David", "Bradley", role = "ctb", comment = "https://github.com/DBradley27"),
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person("Houyun", "Huang", role = "ctb", email = 'houyunhuang@163.com', comment = "https://github.com/houyunhuang"),
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person("Patrick", "Schupp", role = "ctb", email = 'pschupp@sonic.net', comment = "https://github.com/pschupp"),
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person("Alec", "Buetow", role = "ctb", email = 'alecbuetow@gmail.com', comment = "https://github.com/alecbuetow")
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)
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Description: Offers a set of functions for extending
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'dendrogram' objects in R, letting you visualize and compare trees of
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'hierarchical clusterings'. You can (1) Adjust a tree's graphical parameters
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- the color, size, type, etc of its branches, nodes and labels. (2)
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Visually and statistically compare different 'dendrograms' to one another.
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Depends: R (>= 3.0.0)
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Imports: utils, stats, datasets, magrittr (>= 1.0.1), ggplot2, viridis
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Suggests: knitr, rmarkdown, testthat, seriation, colorspace, ape,
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microbenchmark, gplots, heatmaply, dynamicTreeCut, pvclust,
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corrplot, DendSer, MASS, cluster, fpc, circlize (>= 0.2.5),
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covr
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Enhances: ggdendro, dendroextras, Hmisc, data.table, rpart, WGCNA,
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moduleColor, distory, phangorn, zoo
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VignetteBuilder: knitr
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LazyData: true
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License: GPL-2 | GPL-3
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URL: https://talgalili.github.io/dendextend/,
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https://github.com/talgalili/dendextend/,
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https://cran.r-project.org/package=dendextend,
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https://www.r-statistics.com/tag/dendextend/,
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https://doi.org/10.1093/bioinformatics/btv428
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BugReports: https://github.com/talgalili/dendextend/issues
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RoxygenNote: 7.3.2
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Encoding: UTF-8
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NeedsCompilation: no
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Packaged: 2024-11-15 05:32:05 UTC; talgalili
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Author: Tal Galili [aut, cre, cph] (https://www.r-statistics.com),
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Yoav Benjamini [ths],
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Gavin Simpson [ctb],
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Gregory Jefferis [aut, ctb] (imported code from his dendroextras
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package),
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Marco Gallotta [ctb] (a.k.a: marcog),
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Johan Renaudie [ctb] (https://github.com/plannapus),
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The R Core Team [ctb] (Thanks for the Infastructure, and code in the
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examples),
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Kurt Hornik [ctb],
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Uwe Ligges [ctb],
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Andrej-Nikolai Spiess [ctb],
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Steve Horvath [ctb],
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Peter Langfelder [ctb],
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skullkey [ctb],
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Mark Van Der Loo [ctb] (https://github.com/markvanderloo d3dendrogram),
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Andrie de Vries [ctb] (ggdendro author),
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Zuguang Gu [ctb] (circlize author),
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Cath [ctb] (https://github.com/CathG),
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John Ma [ctb] (https://github.com/JohnMCMa),
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Krzysiek G [ctb] (https://github.com/storaged),
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Manuela Hummel [ctb] (https://github.com/hummelma),
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Chase Clark [ctb] (https://github.com/chasemc),
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Lucas Graybuck [ctb] (https://github.com/hypercompetent),
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jdetribol [ctb] (https://github.com/jdetribol),
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Ben Ho [ctb] (https://github.com/SplitInf),
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Samuel Perreault [ctb] (https://github.com/samperochkin),
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Christian Hennig [ctb] (http://www.homepages.ucl.ac.uk/~ucakche/),
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David Bradley [ctb] (https://github.com/DBradley27),
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Houyun Huang [ctb] (https://github.com/houyunhuang),
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Patrick Schupp [ctb] (https://github.com/pschupp),
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Alec Buetow [ctb] (https://github.com/alecbuetow)
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Maintainer: Tal Galili <tal.galili@gmail.com>
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Repository: CRAN
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Date/Publication: 2024-11-15 10:40:06 UTC
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Built: R 4.4.2; ; 2025-01-09 03:59:46 UTC; windows
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