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CircosHeatmap-aardio/dist/lib/r-library/Matrix/scripts/SuiteSparse.patch
freefire 6c0061699c add 结构调整
2025-01-12 04:36:52 +08:00

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diff -ruN src/SuiteSparse/AMD/Makefile src/SuiteSparse-patched/AMD/Makefile
--- src/SuiteSparse/AMD/Makefile 1969-12-31 19:00:00
+++ src/SuiteSparse-patched/AMD/Makefile 2024-08-30 22:55:25
@@ -0,0 +1,31 @@
+sources = \
+ Source/amd_1.c Source/amd_l1.c \
+ Source/amd_2.c Source/amd_l2.c \
+ Source/amd_aat.c Source/amd_l_aat.c \
+ Source/amd_control.c Source/amd_l_control.c \
+ Source/amd_defaults.c Source/amd_l_defaults.c \
+ Source/amd_dump.c Source/amd_l_dump.c \
+ Source/amd_info.c Source/amd_l_info.c \
+ Source/amd_order.c Source/amd_l_order.c \
+ Source/amd_post_tree.c Source/amd_l_post_tree.c \
+ Source/amd_postorder.c Source/amd_l_postorder.c \
+ Source/amd_preprocess.c Source/amd_l_preprocess.c \
+ Source/amd_valid.c Source/amd_l_valid.c \
+ Source/amd_version.c
+objects = $(sources:.c=.o)
+archive = AMD.a
+
+PKG_CPPFLAGS = -I./Include -I../SuiteSparse_config
+
+all : $(archive)
+
+$(archive) : $(objects)
+ rm -f $@
+ $(AR) -cr $@ $(objects)
+ $(RANLIB) $@
+
+.c.o :
+ $(CC) $(PKG_CPPFLAGS) $(CPPFLAGS) $(CFLAGS) -c $< -o $*.o
+
+clean :
+ @rm -f $(objects) $(archive)
diff -ruN src/SuiteSparse/CAMD/Makefile src/SuiteSparse-patched/CAMD/Makefile
--- src/SuiteSparse/CAMD/Makefile 1969-12-31 19:00:00
+++ src/SuiteSparse-patched/CAMD/Makefile 2024-08-30 22:55:25
@@ -0,0 +1,30 @@
+sources = \
+ Source/camd_1.c Source/camd_l1.c \
+ Source/camd_2.c Source/camd_l2.c \
+ Source/camd_aat.c Source/camd_l_aat.c \
+ Source/camd_control.c Source/camd_l_control.c \
+ Source/camd_defaults.c Source/camd_l_defaults.c \
+ Source/camd_dump.c Source/camd_l_dump.c \
+ Source/camd_info.c Source/camd_l_info.c \
+ Source/camd_order.c Source/camd_l_order.c \
+ Source/camd_postorder.c Source/camd_l_postorder.c \
+ Source/camd_preprocess.c Source/camd_l_preprocess.c \
+ Source/camd_valid.c Source/camd_l_valid.c \
+ Source/camd_version.c
+objects = $(sources:.c=.o)
+archive = CAMD.a
+
+PKG_CPPFLAGS = -I./Include -I../SuiteSparse_config
+
+all : $(archive)
+
+$(archive) : $(objects)
+ rm -f $@
+ $(AR) -cr $@ $(objects)
+ $(RANLIB) $@
+
+.c.o :
+ $(CC) $(PKG_CPPFLAGS) $(CPPFLAGS) $(CFLAGS) -c $< -o $*.o
+
+clean :
+ @rm -f $(objects) $(archive)
diff -ruN src/SuiteSparse/CAMD/Source/camd_2.c src/SuiteSparse-patched/CAMD/Source/camd_2.c
--- src/SuiteSparse/CAMD/Source/camd_2.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CAMD/Source/camd_2.c 2024-08-30 22:55:25
@@ -1891,7 +1891,9 @@
* ordered via minimum degree and following the constraints. */
CAMD_DEBUG1 (("before dense/empty, k = "ID"\n", k)) ;
+#ifndef NDEBUG
fflush (stdout) ;
+#endif
ASSERT (k + ndense_or_null == n) ;
if (ndense_or_null > 0)
@@ -1922,7 +1924,9 @@
{
CAMD_DEBUG1 (("Dense/empty node: "ID" : "ID" "ID"\n", j,
Pe [j], Elen [j])) ;
+#ifndef NDEBUG
fflush (stdout) ;
+#endif
ASSERT (Pe [j] == n && Elen [j] == EMPTY) ;
i++ ;
Bucket [C [j]]++ ;
diff -ruN src/SuiteSparse/CCOLAMD/Makefile src/SuiteSparse-patched/CCOLAMD/Makefile
--- src/SuiteSparse/CCOLAMD/Makefile 1969-12-31 19:00:00
+++ src/SuiteSparse-patched/CCOLAMD/Makefile 2024-08-30 22:55:25
@@ -0,0 +1,18 @@
+sources = Source/ccolamd.c Source/ccolamd_l.c Source/ccolamd_version.c
+objects = $(sources:.c=.o)
+archive = CCOLAMD.a
+
+PKG_CPPFLAGS = -I./Include -I../SuiteSparse_config
+
+all : $(archive)
+
+$(archive) : $(objects)
+ rm -f $@
+ $(AR) -cr $@ $(objects)
+ $(RANLIB) $@
+
+.c.o :
+ $(CC) $(PKG_CPPFLAGS) $(CPPFLAGS) $(CFLAGS) -c $< -o $*.o
+
+clean :
+ @rm -f $(objects) $(archive)
diff -ruN src/SuiteSparse/CCOLAMD/Source/ccolamd.c src/SuiteSparse-patched/CCOLAMD/Source/ccolamd.c
--- src/SuiteSparse/CCOLAMD/Source/ccolamd.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CCOLAMD/Source/ccolamd.c 2024-08-30 22:55:25
@@ -1545,7 +1545,9 @@
Int *dead_cols ;
Int set1 ;
Int set2 ;
+#ifndef NDEBUG
Int cs ;
+#endif
int ok ;
@@ -1894,7 +1896,9 @@
p [k] = col ;
ASSERT (A [col] == EMPTY) ;
+#ifndef NDEBUG
cs = CMEMBER (col) ;
+#endif
ASSERT (k >= cset_start [cs] && k < cset_start [cs+1]) ;
A [col] = k ;
@@ -1911,8 +1915,8 @@
if (A [col] == EMPTY)
{
k = Col [col].shared2.order ;
- cs = CMEMBER (col) ;
#ifndef NDEBUG
+ cs = CMEMBER (col) ;
dead_cols [cs]-- ;
#endif
ASSERT (k >= cset_start [cs] && k < cset_start [cs+1]) ;
diff -ruN src/SuiteSparse/CHOLMOD/Check/cholmod_check.c src/SuiteSparse-patched/CHOLMOD/Check/cholmod_check.c
--- src/SuiteSparse/CHOLMOD/Check/cholmod_check.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Check/cholmod_check.c 2024-08-30 22:55:25
@@ -216,7 +216,6 @@
//--------------------------------------------------------------------------
RETURN_IF_NULL_COMMON (FALSE) ;
- int init_print = print ;
P2 ("%s", "\n") ;
@@ -965,7 +964,7 @@
)
{
void *Xx, *Xz ;
- Int i, j, d, nrow, ncol, nzmax, nz, init_print, count ;
+ Int i, j, d, nrow, ncol, nzmax, init_print, count ;
const char *type = "dense" ;
//--------------------------------------------------------------------------
@@ -1034,7 +1033,6 @@
{
init_print = print ;
ETC_START (count, 9) ;
- nz = nrow * ncol ;
for (j = 0 ; j < ncol ; j++)
{
ETC (j == ncol-1, count, 5) ;
@@ -1487,10 +1485,10 @@
void *Lx, *Lz ;
Int *Lp, *Li, *Lnz, *Lnext, *Lprev, *Perm, *ColCount, *Lpi, *Lpx, *Super,
*Ls ;
- Int n, nzmax, j, p, pend, i, nz, ordering, space, is_monotonic, minor,
- count, precise, init_print, ilast, lnz, head, tail, jprev, plast,
- jnext, examine_super, nsuper, s, k1, k2, psi, psend, psx, nsrow, nscol,
- ps2, psxend, ssize, xsize, maxcsize, maxesize, nsrow2, jj, ii ;
+ Int n, nzmax, j, p, pend, i, nz, space, is_monotonic, minor,
+ count, init_print, ilast, lnz, head, tail, jprev, plast,
+ jnext, examine_super, nsuper, s, k1, k2, psi, psend, psx = 0, nsrow, nscol,
+ psxend, ssize, xsize, maxcsize, maxesize, nsrow2, jj, ii ;
Int check_Lpx ;
const char *type = "factor" ;
@@ -1512,7 +1510,6 @@
n = L->n ;
minor = L->minor ;
- ordering = L->ordering ;
int xtype = L->xtype ;
int dtype = L->dtype ;
@@ -1520,8 +1517,6 @@
ColCount = L->ColCount ;
lnz = 0 ;
- precise = Common->precise ;
-
P3 (" "ID"", n) ;
P3 ("-by-"ID"", n) ;
@@ -1896,7 +1891,6 @@
nsrow = psend - psi ;
nscol = k2 - k1 ;
nsrow2 = nsrow - nscol ;
- ps2 = psi + nscol ;
if (check_Lpx)
{
diff -ruN src/SuiteSparse/CHOLMOD/Check/cholmod_write.c src/SuiteSparse-patched/CHOLMOD/Check/cholmod_write.c
--- src/SuiteSparse/CHOLMOD/Check/cholmod_write.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Check/cholmod_write.c 2024-08-30 22:55:25
@@ -163,7 +163,7 @@
for (width = 6 ; width < 20 ; width++)
{
- sprintf (s, "%.*g", width, x) ;
+ snprintf (s, MAXLINE, "%.*g", width, x) ;
sscanf (s, "%lg", &y) ;
if (x == y) break ;
}
@@ -354,7 +354,7 @@
double x = 0, z = 0 ;
void *Ax, *Az ;
Int *Ap, *Ai, *Anz, *Zp, *Zi, *Znz ;
- Int nrow, ncol, is_complex, symmetry, i, j, q, iz, p, nz, is_binary, stype,
+ Int nrow, ncol, is_complex, i, j, q, iz, p, nz, is_binary, stype,
is_integer, asym, is_sym, apacked, zpacked, pend, qend, zsym ;
int ok, xtype, dtype ;
@@ -527,7 +527,6 @@
// A is rectangular or unsymmetric
ok = ok && (fprintf (f, " general\n") > 0) ;
is_sym = FALSE ;
- symmetry = CHOLMOD_MM_UNSYMMETRIC ;
break ;
case CHOLMOD_MM_SYMMETRIC:
@@ -535,7 +534,6 @@
// A is symmetric
ok = ok && (fprintf (f, " symmetric\n") > 0) ;
is_sym = TRUE ;
- symmetry = CHOLMOD_MM_SYMMETRIC ;
break ;
case CHOLMOD_MM_HERMITIAN:
@@ -543,14 +541,12 @@
// A is Hermitian
ok = ok && (fprintf (f, " Hermitian\n") > 0) ;
is_sym = TRUE ;
- symmetry = CHOLMOD_MM_HERMITIAN ;
break ;
case CHOLMOD_MM_SKEW_SYMMETRIC:
// A is skew symmetric
ok = ok && (fprintf (f, " skew-symmetric\n") > 0) ;
is_sym = TRUE ;
- symmetry = CHOLMOD_MM_SKEW_SYMMETRIC ;
break ;
}
diff -ruN src/SuiteSparse/CHOLMOD/Cholesky/cholmod_analyze.c src/SuiteSparse-patched/CHOLMOD/Cholesky/cholmod_analyze.c
--- src/SuiteSparse/CHOLMOD/Cholesky/cholmod_analyze.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Cholesky/cholmod_analyze.c 2024-08-30 22:55:25
@@ -399,7 +399,7 @@
Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent,
*Post, *Perm, *Lparent, *Lcolcount ;
cholmod_factor *L ;
- Int k, n, method, nmethods, status, default_strategy, ncol,
+ Int k, n, method, nmethods, status, default_strategy,
skip_analysis, skip_best ;
Int amd_backup ;
int ok = TRUE ;
@@ -421,7 +421,6 @@
//--------------------------------------------------------------------------
n = A->nrow ;
- ncol = A->ncol ;
//--------------------------------------------------------------------------
// set the default strategy
diff -ruN src/SuiteSparse/CHOLMOD/Cholesky/cholmod_factorize.c src/SuiteSparse-patched/CHOLMOD/Cholesky/cholmod_factorize.c
--- src/SuiteSparse/CHOLMOD/Cholesky/cholmod_factorize.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Cholesky/cholmod_factorize.c 2024-08-30 22:55:25
@@ -104,7 +104,7 @@
{
cholmod_sparse *S, *F, *A1, *A2 ;
- Int nrow, ncol, stype, convert, n, grow2, status ;
+ Int nrow, ncol, stype, convert, grow2, status ;
int ok = TRUE ;
//--------------------------------------------------------------------------
@@ -118,7 +118,6 @@
RETURN_IF_XTYPE_INVALID (L, CHOLMOD_PATTERN, CHOLMOD_ZOMPLEX, FALSE) ;
nrow = A->nrow ;
ncol = A->ncol ;
- n = L->n ;
stype = A->stype ;
if (L->n != A->nrow)
{
diff -ruN src/SuiteSparse/CHOLMOD/Cholesky/cholmod_resymbol.c src/SuiteSparse-patched/CHOLMOD/Cholesky/cholmod_resymbol.c
--- src/SuiteSparse/CHOLMOD/Cholesky/cholmod_resymbol.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Cholesky/cholmod_resymbol.c 2024-08-30 22:55:25
@@ -102,8 +102,6 @@
//--------------------------------------------------------------------------
Int stype = A->stype ;
- Int nrow = A->nrow ;
- Int ncol = A->ncol ;
// s = 2*nrow + (stype ? 0 : ncol)
int ok = TRUE ;
diff -ruN src/SuiteSparse/CHOLMOD/Cholesky/cholmod_solve.c src/SuiteSparse-patched/CHOLMOD/Cholesky/cholmod_solve.c
--- src/SuiteSparse/CHOLMOD/Cholesky/cholmod_solve.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Cholesky/cholmod_solve.c 2024-08-30 22:55:25
@@ -203,8 +203,8 @@
cholmod_dense *Y = NULL, *X = NULL ;
cholmod_sparse *C, *Yset, C_header, Yset_header, *Xset ;
Int *Perm = NULL, *IPerm = NULL ;
- Int n, nrhs, ncols, k1, nr, ytype, k, blen, p, i, d, nrow ;
- Int Cp [2], Ysetp [2], *Ci, *Yseti, ysetlen ;
+ Int n, nrhs, ncols, k1, nr, ytype, k, blen, p, d, nrow ;
+ Int Cp [2], Ysetp [2], *Ci, *Yseti ;
RETURN_IF_NULL_COMMON (FALSE) ;
RETURN_IF_NULL (L, FALSE) ;
diff -ruN src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_psolve_worker.c src/SuiteSparse-patched/CHOLMOD/Cholesky/t_cholmod_psolve_worker.c
--- src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_psolve_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Cholesky/t_cholmod_psolve_worker.c 2024-08-30 22:55:25
@@ -265,12 +265,17 @@
//--------------------------------------------------------------------------
Real *Yx, *Yz, *Xx, *Xz ;
- Int k2, nk, p, k, j, nrow, ncol, d, dj, j2 ;
+ Int k2, p, k, j, nrow, ncol, d, dj, j2 ;
+#ifndef NDEBUG
+ Int nk ;
+#endif
ncol = X->ncol ;
nrow = X->nrow ;
k2 = MIN (k1+ncols, ncol) ;
+#ifndef NDEBUG
nk = MAX (k2 - k1, 0) ;
+#endif
d = X->d ;
Xx = X->x ;
Xz = X->z ;
diff -ruN src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_resymbol_worker.c src/SuiteSparse-patched/CHOLMOD/Cholesky/t_cholmod_resymbol_worker.c
--- src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_resymbol_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Cholesky/t_cholmod_resymbol_worker.c 2024-08-30 22:55:25
@@ -29,12 +29,13 @@
Int *Ap = A->p ;
Int *Anz = A->nz ;
bool apacked = A->packed ;
- bool sorted = A->sorted ;
int stype = A->stype ;
Int *Li = L->i ;
Real *Lx = L->x ;
+#ifdef ZOMPLEX
Real *Lz = L->z ;
+#endif
Int *Lp = L->p ;
Int *Lnz = L->nz ;
diff -ruN src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_rowfac_worker.c src/SuiteSparse-patched/CHOLMOD/Cholesky/t_cholmod_rowfac_worker.c
--- src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_rowfac_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Cholesky/t_cholmod_rowfac_worker.c 2024-08-30 22:55:25
@@ -49,11 +49,14 @@
#ifdef ZOMPLEX
Real yz [1], lz [1], fz [1] ;
#endif
- Real *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
+ Real *Ax, *Lx, *Wx, *Fx ;
+#ifdef ZOMPLEX
+ Real *Az, *Lz, *Wz, *Fz ;
+#endif
Int *Ap, *Anz, *Ai, *Lp, *Lnz, *Li, *Lnext, *Flag, *Stack, *Fp, *Fi, *Fnz,
*Iwork ;
Int i, p, k, t, pf, pfend, top, s, mark, pend, n, lnz, is_ll, multadds,
- use_bound, packed, stype, Fpacked, sorted, nzmax, len, parent ;
+ use_bound, packed, stype, Fpacked, sorted, len, parent ;
#ifndef REAL
Int dk_imaginary ;
#endif
@@ -71,7 +74,9 @@
Fp = NULL ;
Fi = NULL ;
Fx = NULL ;
+#ifdef ZOMPLEX
Fz = NULL ;
+#endif
Fnz = NULL ;
Fpacked = TRUE ;
}
@@ -81,7 +86,9 @@
Fp = F->p ;
Fi = F->i ;
Fx = F->x ;
+#ifdef ZOMPLEX
Fz = F->z ;
+#endif
Fnz = F->nz ;
Fpacked = F->packed ;
}
@@ -89,7 +96,9 @@
Ap = A->p ; // size A->ncol+1, column pointers of A
Ai = A->i ; // size nz = Ap [A->ncol], row indices of A
Ax = A->x ; // size nz, numeric values of A
+#ifdef ZOMPLEX
Az = A->z ;
+#endif
Anz = A->nz ;
packed = A->packed ;
sorted = A->sorted ;
@@ -153,8 +162,9 @@
Lnext = L->next ; // size n+2
Li = L->i ; // size L->nzmax, can change in size
Lx = L->x ; // size L->nzmax or 2*L->nzmax, can change in size
+#ifdef ZOMPLEX
Lz = L->z ; // size L->nzmax for zomplex case, can change in size
- nzmax = L->nzmax ;
+#endif
ASSERT (Lnz != NULL && Li != NULL && Lx != NULL) ;
//--------------------------------------------------------------------------
@@ -166,9 +176,13 @@
Flag = Common->Flag ; // size n, Flag [i] < mark must hold
Wx = Common->Xwork ; // size n if real, 2*n if complex or
// zomplex. Xwork [i] == 0 must hold.
+#ifdef ZOMPLEX
Wz = Wx + n ; // size n for zomplex case only
+#endif
mark = Common->mark ;
+#ifndef NDEBUG
size_t wsize = (L->xtype == CHOLMOD_REAL ? 1:2) * ((size_t) n) ;
+#endif
ASSERT (Common->xworkbytes >= wsize * sizeof (Real)) ;
//--------------------------------------------------------------------------
@@ -388,7 +402,9 @@
}
Li = L->i ; // L->i, L->x, L->z may have moved
Lx = L->x ;
+#ifdef ZOMPLEX
Lz = L->z ;
+#endif
p = Lp [i] + lnz ; // contents of L->p changed
ASSERT (p < Lp [Lnext [i]]) ;
}
diff -ruN src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_solve_worker.c src/SuiteSparse-patched/CHOLMOD/Cholesky/t_cholmod_solve_worker.c
--- src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_solve_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Cholesky/t_cholmod_solve_worker.c 2024-08-30 22:55:25
@@ -70,7 +70,9 @@
Int *Lp = L->p ;
Real *Lx = L->x ;
Real *Yx = Y->x ;
+#ifdef ZOMPLEX
Real *Yz = Y->z ;
+#endif
if (Yset)
{
@@ -209,7 +211,9 @@
//--------------------------------------------------------------------------
Real *Yx = Y->x ;
+#ifdef ZOMPLEX
Real *Yz = Y->z ;
+#endif
Int *Ysetp = Yset->p ;
Int *Yseti = Yset->i ;
Int ysetlen = Ysetp [1] ;
@@ -227,7 +231,9 @@
// Y (C) = B (Bset)
Real *Bx = B->x ;
+#ifdef ZOMPLEX
Real *Bz = B->z ;
+#endif
Int *Bsetp = Bset->p ;
Int *Bseti = Bset->i ;
Int *Bsetnz = Bset->nz ;
@@ -262,12 +268,16 @@
{
Real *Xx = X->x ;
+#ifdef ZOMPLEX
Real *Xz = X->z ;
+#endif
Int *Xseti = Xset->i ;
Int *Xsetp = Xset->p ;
Real *Yx = Y->x ;
+#ifdef ZOMPLEX
Real *Yz = Y->z ;
+#endif
Int *Ysetp = Yset->p ;
Int *Yseti = Yset->i ;
diff -ruN src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_spsolve_worker.c src/SuiteSparse-patched/CHOLMOD/Cholesky/t_cholmod_spsolve_worker.c
--- src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_spsolve_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Cholesky/t_cholmod_spsolve_worker.c 2024-08-30 22:55:25
@@ -30,12 +30,16 @@
Int *Bp = B->p ;
Int *Bi = B->i ;
Real *Bx = B->x ;
+#ifdef ZOMPLEX
Real *Bz = B->z ;
+#endif
Int *Bnz = B->nz ;
bool packed = B->packed ;
Real *B4x = B4->x ;
+#ifdef ZOMPLEX
Real *B4z = B4->z ;
+#endif
Int n = B4->nrow ;
@@ -78,13 +82,17 @@
Int *Xp = X->p ;
Int *Xi = X->i ;
Real *Xx = X->x ;
+#ifdef ZOMPLEX
Real *Xz = X->z ;
+#endif
size_t px = (*xnz) ;
size_t nzmax = X->nzmax ;
Real *X4x = X4->x ;
+#ifdef ZOMPLEX
Real *X4z = X4->z ;
+#endif
Int n = X4->nrow ;
//--------------------------------------------------------------------------
@@ -139,7 +147,9 @@
}
Xi = X->i ;
Xx = X->x ;
+#ifdef ZOMPLEX
Xz = X->z ;
+#endif
}
Xi [px] = i ;
ASSIGN (Xx, Xz, px, X4x, X4z, p) ;
@@ -180,7 +190,9 @@
bool packed = B->packed ;
Real *B4x = B4->x ;
+#ifdef ZOMPLEX
Real *B4z = B4->z ;
+#endif
Int n = B4->nrow ;
diff -ruN src/SuiteSparse/CHOLMOD/Include/cholmod.h src/SuiteSparse-patched/CHOLMOD/Include/cholmod.h
--- src/SuiteSparse/CHOLMOD/Include/cholmod.h 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Include/cholmod.h 2024-08-30 22:55:25
@@ -1421,8 +1421,8 @@
int sorted, // ignored; C is now always returned as sorted
cholmod_common *Common
) ;
-cholmod_sparse *cholmod_l_add (cholmod_sparse *, cholmod_sparse *, double *,
- double *, int, int, cholmod_common *) ;
+cholmod_sparse *cholmod_l_add (cholmod_sparse *, cholmod_sparse *, double [2],
+ double [2], int, int, cholmod_common *) ;
//------------------------------------------------------------------------------
// cholmod_sparse_xtype: change the xtype and/or dtype of a sparse matrix
@@ -2697,7 +2697,7 @@
cholmod_factor *L, // resulting factorization
cholmod_common *Common
) ;
-int cholmod_l_factorize_p (cholmod_sparse *, double *, int64_t *, size_t,
+int cholmod_l_factorize_p (cholmod_sparse *, double [2], int64_t *, size_t,
cholmod_factor *, cholmod_common *) ;
//------------------------------------------------------------------------------
@@ -2895,7 +2895,7 @@
cholmod_factor *L,
cholmod_common *Common
) ;
-int cholmod_l_rowfac (cholmod_sparse *, cholmod_sparse *, double *, size_t,
+int cholmod_l_rowfac (cholmod_sparse *, cholmod_sparse *, double [2], size_t,
size_t, cholmod_factor *, cholmod_common *) ;
//------------------------------------------------------------------------------
@@ -2920,7 +2920,7 @@
cholmod_factor *L,
cholmod_common *Common
) ;
-int cholmod_l_rowfac_mask (cholmod_sparse *, cholmod_sparse *, double *,
+int cholmod_l_rowfac_mask (cholmod_sparse *, cholmod_sparse *, double [2],
size_t, size_t, int64_t *, int64_t *, cholmod_factor *, cholmod_common *) ;
int cholmod_rowfac_mask2
@@ -2939,7 +2939,7 @@
cholmod_factor *L,
cholmod_common *Common
) ;
-int cholmod_l_rowfac_mask2 (cholmod_sparse *, cholmod_sparse *, double *,
+int cholmod_l_rowfac_mask2 (cholmod_sparse *, cholmod_sparse *, double [2],
size_t, size_t, int64_t *, int64_t, int64_t *, cholmod_factor *,
cholmod_common *) ;
@@ -3204,7 +3204,7 @@
cholmod_dense *Y, // resulting dense matrix
cholmod_common *Common
) ;
-int cholmod_l_sdmult (cholmod_sparse *, int, double *, double *,
+int cholmod_l_sdmult (cholmod_sparse *, int, double [2], double [2],
cholmod_dense *, cholmod_dense *Y, cholmod_common *) ;
//------------------------------------------------------------------------------
@@ -3504,7 +3504,7 @@
cholmod_dense *DeltaB, // change in b, zero on output
cholmod_common *Common
) ;
-int cholmod_l_rowadd_solve (size_t, cholmod_sparse *, double *,
+int cholmod_l_rowadd_solve (size_t, cholmod_sparse *, double [2],
cholmod_factor *, cholmod_dense *, cholmod_dense *, cholmod_common *) ;
//------------------------------------------------------------------------------
@@ -3528,7 +3528,7 @@
cholmod_dense *DeltaB, // change in b, zero on output
cholmod_common *Common
) ;
-int cholmod_l_rowadd_mark (size_t, cholmod_sparse *, double *, int64_t *,
+int cholmod_l_rowadd_mark (size_t, cholmod_sparse *, double [2], int64_t *,
cholmod_factor *, cholmod_dense *, cholmod_dense *, cholmod_common *) ;
//------------------------------------------------------------------------------
@@ -3575,7 +3575,7 @@
cholmod_dense *DeltaB, // change in b, zero on output
cholmod_common *Common
) ;
-int cholmod_l_rowdel_solve (size_t, cholmod_sparse *, double *,
+int cholmod_l_rowdel_solve (size_t, cholmod_sparse *, double [2],
cholmod_factor *, cholmod_dense *, cholmod_dense *, cholmod_common *) ;
//------------------------------------------------------------------------------
@@ -3599,7 +3599,7 @@
cholmod_dense *DeltaB, // change in b, zero on output
cholmod_common *Common
) ;
-int cholmod_l_rowdel_mark (size_t, cholmod_sparse *, double *, int64_t *,
+int cholmod_l_rowdel_mark (size_t, cholmod_sparse *, double [2], int64_t *,
cholmod_factor *, cholmod_dense *, cholmod_dense *, cholmod_common *) ;
#endif
@@ -3929,7 +3929,7 @@
cholmod_factor *L, // factorization
cholmod_common *Common
) ;
-int cholmod_l_super_numeric (cholmod_sparse *, cholmod_sparse *, double *,
+int cholmod_l_super_numeric (cholmod_sparse *, cholmod_sparse *, double [2],
cholmod_factor *, cholmod_common *) ;
//------------------------------------------------------------------------------
diff -ruN src/SuiteSparse/CHOLMOD/Makefile src/SuiteSparse-patched/CHOLMOD/Makefile
--- src/SuiteSparse/CHOLMOD/Makefile 1969-12-31 19:00:00
+++ src/SuiteSparse-patched/CHOLMOD/Makefile 2024-08-30 22:55:25
@@ -0,0 +1,128 @@
+sources = \
+ Check/cholmod_check.c Check/cholmod_l_check.c \
+ Check/cholmod_read.c Check/cholmod_l_read.c \
+ Check/cholmod_write.c Check/cholmod_l_write.c \
+ Cholesky/cholmod_amd.c Cholesky/cholmod_l_amd.c \
+ Cholesky/cholmod_analyze.c Cholesky/cholmod_l_analyze.c \
+ Cholesky/cholmod_colamd.c Cholesky/cholmod_l_colamd.c \
+ Cholesky/cholmod_etree.c Cholesky/cholmod_l_etree.c \
+ Cholesky/cholmod_factorize.c Cholesky/cholmod_l_factorize.c \
+ Cholesky/cholmod_postorder.c Cholesky/cholmod_l_postorder.c \
+ Cholesky/cholmod_rcond.c Cholesky/cholmod_l_rcond.c \
+ Cholesky/cholmod_resymbol.c Cholesky/cholmod_l_resymbol.c \
+ Cholesky/cholmod_rowcolcounts.c Cholesky/cholmod_l_rowcolcounts.c \
+ Cholesky/cholmod_rowfac.c Cholesky/cholmod_l_rowfac.c \
+ Cholesky/cholmod_solve.c Cholesky/cholmod_l_solve.c \
+ Cholesky/cholmod_spsolve.c Cholesky/cholmod_l_spsolve.c \
+ Utility/cholmod_aat.c Utility/cholmod_l_aat.c \
+ Utility/cholmod_add.c Utility/cholmod_l_add.c \
+ Utility/cholmod_add_size_t.c Utility/cholmod_l_add_size_t.c \
+ Utility/cholmod_alloc_factor.c Utility/cholmod_l_alloc_factor.c \
+ Utility/cholmod_alloc_work.c Utility/cholmod_l_alloc_work.c \
+ Utility/cholmod_allocate_dense.c Utility/cholmod_l_allocate_dense.c \
+ Utility/cholmod_allocate_factor.c Utility/cholmod_l_allocate_factor.c \
+ Utility/cholmod_allocate_sparse.c Utility/cholmod_l_allocate_sparse.c \
+ Utility/cholmod_allocate_triplet.c Utility/cholmod_l_allocate_triplet.c \
+ Utility/cholmod_allocate_work.c Utility/cholmod_l_allocate_work.c \
+ Utility/cholmod_band.c Utility/cholmod_l_band.c \
+ Utility/cholmod_band_nnz.c Utility/cholmod_l_band_nnz.c \
+ Utility/cholmod_calloc.c Utility/cholmod_l_calloc.c \
+ Utility/cholmod_change_factor.c Utility/cholmod_l_change_factor.c \
+ Utility/cholmod_clear_flag.c Utility/cholmod_l_clear_flag.c \
+ Utility/cholmod_copy.c Utility/cholmod_l_copy.c \
+ Utility/cholmod_copy_dense.c Utility/cholmod_l_copy_dense.c \
+ Utility/cholmod_copy_dense2.c Utility/cholmod_l_copy_dense2.c \
+ Utility/cholmod_copy_factor.c Utility/cholmod_l_copy_factor.c \
+ Utility/cholmod_copy_sparse.c Utility/cholmod_l_copy_sparse.c \
+ Utility/cholmod_copy_triplet.c Utility/cholmod_l_copy_triplet.c \
+ Utility/cholmod_cumsum.c Utility/cholmod_l_cumsum.c \
+ Utility/cholmod_dbound.c Utility/cholmod_l_dbound.c \
+ Utility/cholmod_defaults.c Utility/cholmod_l_defaults.c \
+ Utility/cholmod_dense_nnz.c Utility/cholmod_l_dense_nnz.c \
+ Utility/cholmod_dense_to_sparse.c Utility/cholmod_l_dense_to_sparse.c \
+ Utility/cholmod_divcomplex.c Utility/cholmod_l_divcomplex.c \
+ Utility/cholmod_ensure_dense.c Utility/cholmod_l_ensure_dense.c \
+ Utility/cholmod_error.c Utility/cholmod_l_error.c \
+ Utility/cholmod_eye.c Utility/cholmod_l_eye.c \
+ Utility/cholmod_factor_to_sparse.c Utility/cholmod_l_factor_to_sparse.c \
+ Utility/cholmod_finish.c Utility/cholmod_l_finish.c \
+ Utility/cholmod_free.c Utility/cholmod_l_free.c \
+ Utility/cholmod_free_dense.c Utility/cholmod_l_free_dense.c \
+ Utility/cholmod_free_factor.c Utility/cholmod_l_free_factor.c \
+ Utility/cholmod_free_sparse.c Utility/cholmod_l_free_sparse.c \
+ Utility/cholmod_free_triplet.c Utility/cholmod_l_free_triplet.c \
+ Utility/cholmod_free_work.c Utility/cholmod_l_free_work.c \
+ Utility/cholmod_hypot.c Utility/cholmod_l_hypot.c \
+ Utility/cholmod_malloc.c Utility/cholmod_l_malloc.c \
+ Utility/cholmod_maxrank.c Utility/cholmod_l_maxrank.c \
+ Utility/cholmod_memdebug.c \
+ Utility/cholmod_mult_size_t.c Utility/cholmod_l_mult_size_t.c \
+ Utility/cholmod_mult_uint64_t.c \
+ Utility/cholmod_nnz.c Utility/cholmod_l_nnz.c \
+ Utility/cholmod_ones.c Utility/cholmod_l_ones.c \
+ Utility/cholmod_pack_factor.c Utility/cholmod_l_pack_factor.c \
+ Utility/cholmod_ptranspose.c Utility/cholmod_l_ptranspose.c \
+ Utility/cholmod_realloc.c Utility/cholmod_l_realloc.c \
+ Utility/cholmod_realloc_multiple.c Utility/cholmod_l_realloc_multiple.c \
+ Utility/cholmod_reallocate_column.c Utility/cholmod_l_reallocate_column.c \
+ Utility/cholmod_reallocate_factor.c Utility/cholmod_l_reallocate_factor.c \
+ Utility/cholmod_reallocate_sparse.c Utility/cholmod_l_reallocate_sparse.c \
+ Utility/cholmod_reallocate_triplet.c Utility/cholmod_l_reallocate_triplet.c \
+ Utility/cholmod_sbound.c Utility/cholmod_l_sbound.c \
+ Utility/cholmod_score_comp.c Utility/cholmod_l_score_comp.c \
+ Utility/cholmod_set_empty.c Utility/cholmod_l_set_empty.c \
+ Utility/cholmod_sort.c Utility/cholmod_l_sort.c \
+ Utility/cholmod_sparse_to_dense.c Utility/cholmod_l_sparse_to_dense.c \
+ Utility/cholmod_sparse_to_triplet.c Utility/cholmod_l_sparse_to_triplet.c \
+ Utility/cholmod_speye.c Utility/cholmod_l_speye.c \
+ Utility/cholmod_spzeros.c Utility/cholmod_l_spzeros.c \
+ Utility/cholmod_start.c Utility/cholmod_l_start.c \
+ Utility/cholmod_transpose.c Utility/cholmod_l_transpose.c \
+ Utility/cholmod_transpose_sym.c Utility/cholmod_l_transpose_sym.c \
+ Utility/cholmod_transpose_unsym.c Utility/cholmod_l_transpose_unsym.c \
+ Utility/cholmod_triplet_to_sparse.c Utility/cholmod_l_triplet_to_sparse.c \
+ Utility/cholmod_version.c Utility/cholmod_l_version.c \
+ Utility/cholmod_xtype.c Utility/cholmod_l_xtype.c \
+ Utility/cholmod_zeros.c Utility/cholmod_l_zeros.c \
+ MatrixOps/cholmod_drop.c MatrixOps/cholmod_l_drop.c \
+ MatrixOps/cholmod_horzcat.c MatrixOps/cholmod_l_horzcat.c \
+ MatrixOps/cholmod_norm.c MatrixOps/cholmod_l_norm.c \
+ MatrixOps/cholmod_scale.c MatrixOps/cholmod_l_scale.c \
+ MatrixOps/cholmod_sdmult.c MatrixOps/cholmod_l_sdmult.c \
+ MatrixOps/cholmod_ssmult.c MatrixOps/cholmod_l_ssmult.c \
+ MatrixOps/cholmod_submatrix.c MatrixOps/cholmod_l_submatrix.c \
+ MatrixOps/cholmod_symmetry.c MatrixOps/cholmod_l_symmetry.c \
+ MatrixOps/cholmod_vertcat.c MatrixOps/cholmod_l_vertcat.c \
+ Modify/cholmod_rowadd.c Modify/cholmod_l_rowadd.c \
+ Modify/cholmod_rowdel.c Modify/cholmod_l_rowdel.c \
+ Modify/cholmod_updown.c Modify/cholmod_l_updown.c \
+ Partition/cholmod_camd.c Partition/cholmod_l_camd.c \
+ Partition/cholmod_ccolamd.c Partition/cholmod_l_ccolamd.c \
+ Partition/cholmod_csymamd.c Partition/cholmod_l_csymamd.c \
+ Partition/cholmod_metis.c Partition/cholmod_l_metis.c \
+ Partition/cholmod_metis_wrapper.c \
+ Partition/cholmod_nesdis.c Partition/cholmod_l_nesdis.c \
+ Supernodal/cholmod_super_numeric.c Supernodal/cholmod_l_super_numeric.c \
+ Supernodal/cholmod_super_solve.c Supernodal/cholmod_l_super_solve.c \
+ Supernodal/cholmod_super_symbolic.c Supernodal/cholmod_l_super_symbolic.c
+objects = $(sources:.c=.o)
+archive = CHOLMOD.a
+
+PKG_CPPFLAGS = -I./Include -I../SuiteSparse_config \
+ -I../AMD/Include -I../COLAMD/Include \
+ -I../CAMD/Include -I../CCOLAMD/Include \
+ -I. -I./SuiteSparse_metis/include \
+ -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis
+
+all : $(archive)
+
+$(archive) : $(objects)
+ rm -f $@
+ $(AR) -cr $@ $(objects)
+ $(RANLIB) $@
+
+.c.o :
+ $(CC) $(PKG_CPPFLAGS) $(CPPFLAGS) $(CFLAGS) -c $< -o $*.o
+
+clean :
+ @rm -f $(objects) $(archive)
diff -ruN src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_ssmult.c src/SuiteSparse-patched/CHOLMOD/MatrixOps/cholmod_ssmult.c
--- src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_ssmult.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/MatrixOps/cholmod_ssmult.c 2024-08-30 22:55:25
@@ -84,7 +84,7 @@
// check inputs
//--------------------------------------------------------------------------
- cholmod_sparse *C = NULL, *A2 = NULL, *B2 = NULL, *C2 = NULL ;
+ cholmod_sparse *C = NULL, *A2 = NULL, *B2 = NULL ;
RETURN_IF_NULL_COMMON (NULL) ;
RETURN_IF_NULL (A, NULL) ;
@@ -196,7 +196,6 @@
Int ncol = B->ncol ;
// get workspace
- void *W = Common->Xwork ; // size nrow, unused if values is false
Int *Flag = Common->Flag ; // size nrow, Flag [0..nrow-1] < mark on input
//--------------------------------------------------------------------------
diff -ruN src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_drop_worker.c src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_drop_worker.c
--- src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_drop_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_drop_worker.c 2024-08-30 22:55:25
@@ -59,7 +59,9 @@
Int *Ap = A->p ;
Int *Ai = A->i ;
Real *Ax = A->x ;
+#ifdef ZOMPLEX
Real *Az = A->z ;
+#endif
Int *Anz = A->nz ;
bool packed = A->packed ;
Int ncol = A->ncol ;
diff -ruN src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_horzcat_worker.c src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_horzcat_worker.c
--- src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_horzcat_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_horzcat_worker.c 2024-08-30 22:55:25
@@ -25,23 +25,35 @@
Int *Ap = A->p ;
Int *Anz = A->nz ;
Int *Ai = A->i ;
+#ifndef PATTERN
Real *Ax = A->x ;
+#ifdef ZOMPLEX
Real *Az = A->z ;
+#endif
+#endif
bool apacked = A->packed ;
Int ancol = A->ncol ;
Int *Bp = B->p ;
Int *Bnz = B->nz ;
Int *Bi = B->i ;
+#ifndef PATTERN
Real *Bx = B->x ;
+#ifdef ZOMPLEX
Real *Bz = B->z ;
+#endif
+#endif
bool bpacked = B->packed ;
Int bncol = B->ncol ;
Int *Cp = C->p ;
Int *Ci = C->i ;
+#ifndef PATTERN
Real *Cx = C->x ;
+#ifdef ZOMPLEX
Real *Cz = C->z ;
+#endif
+#endif
Int ncol = C->ncol ;
//--------------------------------------------------------------------------
diff -ruN src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_norm_worker.c src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_norm_worker.c
--- src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_norm_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_norm_worker.c 2024-08-30 22:55:25
@@ -36,7 +36,9 @@
Int nrow = X->nrow ;
Int d = X->d ;
Real *Xx = X->x ;
+#ifdef ZOMPLEX
Real *Xz = X->z ;
+#endif
double xnorm = 0 ;
@@ -158,8 +160,12 @@
Int *Ap = A->p ;
Int *Ai = A->i ;
Int *Anz = A->nz ;
+#ifndef PATTERN
Real *Ax = A->x ;
+#ifdef ZOMPLEX
Real *Az = A->z ;
+#endif
+#endif
Int ncol = A->ncol ;
Int nrow = A->nrow ;
bool packed = A->packed ;
diff -ruN src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_scale_worker.c src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_scale_worker.c
--- src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_scale_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_scale_worker.c 2024-08-30 22:55:25
@@ -28,12 +28,16 @@
Int *Anz = A->nz ;
Int *Ai = A->i ;
Real *Ax = A->x ;
+#ifdef ZOMPLEX
Real *Az = A->z ;
+#endif
bool packed = A->packed ;
Int ncol = A->ncol ;
Real *Sx = S->x ;
+#ifdef ZOMPLEX
Real *Sz = S->z ;
+#endif
//--------------------------------------------------------------------------
// scale the matrix
@@ -55,7 +59,9 @@
Int i = Ai [p] ;
// t = S (i) * A (i,j)
Real tx [2] ;
+#ifdef ZOMPLEX
Real tz [1] ;
+#endif
MULT (tx, tz, 0, Sx, Sz, i, Ax, Az, p) ;
// A (i,j) = t
ASSIGN (Ax, Az, p, tx, tz, 0) ;
@@ -74,7 +80,9 @@
{
// s = S (j)
Real sx [2] ;
+#ifdef ZOMPLEX
Real sz [1] ;
+#endif
ASSIGN (sx, sz, 0, Sx, Sz, j) ;
Int p = Ap [j] ;
@@ -83,7 +91,9 @@
{
// t = A (i,j) * s
Real tx [2] ;
+#ifdef ZOMPLEX
Real tz [1] ;
+#endif
MULT (tx, tz, 0, Ax, Az, p, sx, sz, 0) ;
// A (i,j) = t
ASSIGN (Ax, Az, p, tx, tz, 0) ;
@@ -102,7 +112,9 @@
{
// s = S (j)
Real sx [2] ;
+#ifdef ZOMPLEX
Real sz [1] ;
+#endif
ASSIGN (sx, sz, 0, Sx, Sz, j) ;
Int p = Ap [j] ;
@@ -112,7 +124,9 @@
Int i = Ai [p] ;
// t = A (i,j) * S (i)
Real tx [2] ;
+#ifdef ZOMPLEX
Real tz [1] ;
+#endif
MULT (tx, tz, 0, Ax, Az, p, Sx, Sz, i) ;
// A (i,j) = s * t
MULT (Ax, Az, p, sx, sz, 0, tx, tz, 0) ;
@@ -129,7 +143,9 @@
// s = S (0)
Real sx [2] ;
+#ifdef ZOMPLEX
Real sz [1] ;
+#endif
ASSIGN (sx, sz, 0, Sx, Sz, 0) ;
for (Int j = 0 ; j < ncol ; j++)
@@ -140,7 +156,9 @@
{
// t = s * A (i,j)
Real tx [2] ;
+#ifdef ZOMPLEX
Real tz [1] ;
+#endif
MULT (tx, tz, 0, sx, sz, 0, Ax, Az, p) ;
// A (i,j) = t
ASSIGN (Ax, Az, p, tx, tz, 0) ;
diff -ruN src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_sdmult_worker.c src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_sdmult_worker.c
--- src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_sdmult_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_sdmult_worker.c 2024-08-30 22:55:25
@@ -55,28 +55,37 @@
#endif
size_t ny = transpose ? A->ncol : A->nrow ; // required length of Y
+#ifdef ZOMPLEX
size_t nx = transpose ? A->nrow : A->ncol ; // required length of X
+#endif
- Int nrow = A->nrow ;
Int ncol = A->ncol ;
Int *Ap = A->p ;
Int *Anz = A->nz ;
Int *Ai = A->i ;
Real *Ax = A->x ;
+#ifdef ZOMPLEX
Real *Az = A->z ;
+#endif
bool packed = A->packed ;
Real *Xx = X->x ;
+#ifdef ZOMPLEX
Real *Xz = X->z ;
+#endif
Real *Yx = Y->x ;
+#ifdef ZOMPLEX
Real *Yz = Y->z ;
+#endif
Int kcol = X->ncol ;
size_t dy = Y->d ;
size_t dx = X->d ;
Real *w = W ;
- Real *Wz = W + 4*nx ;
+#ifdef ZOMPLEX
+ Real *Wz = (W) ? W + 4*nx : W ;
+#endif
//--------------------------------------------------------------------------
// Y = beta * Y
@@ -120,7 +129,9 @@
//--------------------------------------------------------------------------
Yx = Y->x ;
+#ifdef ZOMPLEX
Yz = Y->z ;
+#endif
Int k = 0 ;
if (A->stype == 0)
diff -ruN src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_ssmult_worker.c src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_ssmult_worker.c
--- src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_ssmult_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_ssmult_worker.c 2024-08-30 22:55:25
@@ -23,35 +23,51 @@
// get inputs
//--------------------------------------------------------------------------
- Real *W = Common->Xwork ;
-
Int *Ap = A->p ;
Int *Anz = A->nz ;
Int *Ai = A->i ;
+#ifndef PATTERN
Real *Ax = A->x ;
+#ifdef ZOMPLEX
Real *Az = A->z ;
+#endif
+#endif
bool apacked = A->packed ;
Int *Bp = B->p ;
Int *Bnz = B->nz ;
Int *Bi = B->i ;
+#ifndef PATTERN
Real *Bx = B->x ;
+#ifdef ZOMPLEX
Real *Bz = B->z ;
+#endif
+#endif
bool bpacked = B->packed ;
// get the size of C
+#ifdef ZOMPLEX
Int nrow = A->nrow ;
+#endif
Int ncol = B->ncol ;
// get workspace
+#ifndef PATTERN
Real *Wx = Common->Xwork ; // size nrow, unused if C is pattern
+#ifdef ZOMPLEX
Real *Wz = Wx + nrow ; // only used for the zomplex case
+#endif
+#endif
Int *Flag = Common->Flag ; // size nrow, Flag [0..nrow-1] < mark on input
Int *Cp = C->p ;
Int *Ci = C->i ;
+#ifndef PATTERN
Real *Cx = C->x ;
+#ifdef ZOMPLEX
Real *Cz = C->z ;
+#endif
+#endif
//--------------------------------------------------------------------------
// C = A*B
@@ -77,8 +93,12 @@
Int k = Bi [pb] ;
// b = Bx [pb] ;
+#ifndef PATTERN
Real bx [2] ;
+#ifdef ZOMPLEX
Real bz [1] ;
+#endif
+#endif
ASSIGN (bx, bz, 0, Bx, Bz, pb) ;
// add the nonzero pattern of A(:,k) to the pattern of C(:,j)
diff -ruN src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_submatrix_worker.c src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_submatrix_worker.c
--- src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_submatrix_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_submatrix_worker.c 2024-08-30 22:55:25
@@ -29,14 +29,22 @@
Int *Ap = A->p ;
Int *Ai = A->i ;
Int *Anz = A->nz ;
+#ifndef PATTERN
Real *Ax = A->x ;
+#ifdef ZOMPLEX
Real *Az = A->z ;
+#endif
+#endif
bool packed = A->packed ;
Int *Cp = C->p ;
Int *Ci = C->i ;
+#ifndef PATTERN
Real *Cx = C->x ;
+#ifdef ZOMPLEX
Real *Cz = C->z ;
+#endif
+#endif
Int cncol = C->ncol ;
//--------------------------------------------------------------------------
diff -ruN src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_vertcat_worker.c src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_vertcat_worker.c
--- src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_vertcat_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/MatrixOps/t_cholmod_vertcat_worker.c 2024-08-30 22:55:25
@@ -25,22 +25,34 @@
Int *Ap = A->p ;
Int *Anz = A->nz ;
Int *Ai = A->i ;
+#ifndef PATTERN
Real *Ax = A->x ;
+#ifdef ZOMPLEX
Real *Az = A->z ;
+#endif
+#endif
bool apacked = A->packed ;
Int anrow = A->nrow ;
Int *Bp = B->p ;
Int *Bnz = B->nz ;
Int *Bi = B->i ;
+#ifndef PATTERN
Real *Bx = B->x ;
+#ifdef ZOMPLEX
Real *Bz = B->z ;
+#endif
+#endif
bool bpacked = B->packed ;
Int *Cp = C->p ;
Int *Ci = C->i ;
+#ifndef PATTERN
Real *Cx = C->x ;
+#ifdef ZOMPLEX
Real *Cz = C->z ;
+#endif
+#endif
Int ncol = C->ncol ;
//--------------------------------------------------------------------------
diff -ruN src/SuiteSparse/CHOLMOD/Modify/cholmod_rowadd.c src/SuiteSparse-patched/CHOLMOD/Modify/cholmod_rowadd.c
--- src/SuiteSparse/CHOLMOD/Modify/cholmod_rowadd.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Modify/cholmod_rowadd.c 2024-08-30 22:55:25
@@ -136,7 +136,6 @@
RETURN_IF_NULL (R, FALSE) ;
RETURN_IF_XTYPE_INVALID (L, CHOLMOD_PATTERN, CHOLMOD_REAL, FALSE) ;
RETURN_IF_XTYPE_INVALID (R, CHOLMOD_REAL, CHOLMOD_REAL, FALSE) ;
- Int n = L->n ;
Int k = kadd ;
if (kadd >= L->n || k < 0)
{
diff -ruN src/SuiteSparse/CHOLMOD/Modify/cholmod_rowdel.c src/SuiteSparse-patched/CHOLMOD/Modify/cholmod_rowdel.c
--- src/SuiteSparse/CHOLMOD/Modify/cholmod_rowdel.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Modify/cholmod_rowdel.c 2024-08-30 22:55:25
@@ -122,7 +122,6 @@
RETURN_IF_NULL_COMMON (FALSE) ;
RETURN_IF_NULL (L, FALSE) ;
RETURN_IF_XTYPE_INVALID (L, CHOLMOD_PATTERN, CHOLMOD_REAL, FALSE) ;
- Int n = L->n ;
Int k = kdel ;
if (kdel >= L->n || k < 0)
{
diff -ruN src/SuiteSparse/CHOLMOD/Modify/t_cholmod_updown_worker.c src/SuiteSparse-patched/CHOLMOD/Modify/t_cholmod_updown_worker.c
--- src/SuiteSparse/CHOLMOD/Modify/t_cholmod_updown_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Modify/t_cholmod_updown_worker.c 2024-08-30 22:55:25
@@ -148,7 +148,9 @@
double fl = 0 ;
bool use_colmark = (colmark != NULL) ;
+#ifndef NDEBUG
Int *ps1 = NULL ;
+#endif
Int *ps2 = NULL ;
//--------------------------------------------------------------------------
@@ -699,7 +701,9 @@
if (nsets > 0)
{
+#ifndef NDEBUG
ps1 = Set_ps1 [0] ;
+#endif
ps2 = Set_ps2 [0] ;
}
diff -ruN src/SuiteSparse/CHOLMOD/Partition/cholmod_metis.c src/SuiteSparse-patched/CHOLMOD/Partition/cholmod_metis.c
--- src/SuiteSparse/CHOLMOD/Partition/cholmod_metis.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Partition/cholmod_metis.c 2024-08-30 22:55:25
@@ -578,7 +578,7 @@
idx_t *Mp, *Mi, *Mperm, *Miperm ;
cholmod_sparse *B ;
Int i, j, n, nz, p, identity ;
- idx_t nn, zero = 0 ;
+ idx_t nn ;
RETURN_IF_NULL_COMMON (FALSE) ;
RETURN_IF_NULL (A, FALSE) ;
diff -ruN src/SuiteSparse/CHOLMOD/Partition/cholmod_metis_wrapper.h src/SuiteSparse-patched/CHOLMOD/Partition/cholmod_metis_wrapper.h
--- src/SuiteSparse/CHOLMOD/Partition/cholmod_metis_wrapper.h 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Partition/cholmod_metis_wrapper.h 2024-08-30 22:55:25
@@ -16,15 +16,6 @@
#define USE_GKRAND
#endif
-#if defined ( __GNUC__ ) && !defined ( __clang__ )
- // disable memcpy warnings:
- #pragma GCC diagnostic ignored "-Wstringop-overflow="
- // csr.c has misleading indentation:
- #pragma GCC diagnostic ignored "-Wmisleading-indentation"
- // GKlib/error.c:
- #pragma GCC diagnostic ignored "-Wunused-result"
-#endif
-
#if SUITESPARSE_COMPILER_MSC
#undef __thread
#define __thread __declspec(thread)
diff -ruN src/SuiteSparse/CHOLMOD/Partition/cholmod_nesdis.c src/SuiteSparse-patched/CHOLMOD/Partition/cholmod_nesdis.c
--- src/SuiteSparse/CHOLMOD/Partition/cholmod_nesdis.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Partition/cholmod_nesdis.c 2024-08-30 22:55:25
@@ -681,8 +681,11 @@
)
{
- Int n, mark, cj, j, sj, sn, p, i, snode, pstart, pdest, pend, nd_components,
+ Int mark, cj, j, sj, sn, p, i, snode, pstart, pdest, pend, nd_components,
part, first, save_mark ;
+#ifndef NDEBUG
+ Int n ;
+#endif
Int *Bp, *Bi, *Flag ;
//--------------------------------------------------------------------------
@@ -702,7 +705,9 @@
Bp = B->p ;
Bi = B->i ;
+#ifndef NDEBUG
n = B->nrow ;
+#endif
ASSERT (cnode >= EMPTY && cnode < n) ;
ASSERT (IMPLIES (cnode >= 0, Flag [cnode] < EMPTY)) ;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/GKlib.h src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/GKlib.h
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/GKlib.h 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/GKlib.h 2024-08-30 23:20:09
@@ -115,6 +115,17 @@
#include "gk_proto.h"
+#include <R_ext/Print.h>
+#include <R_ext/Error.h>
+
+#undef printf
+#define printf Rprintf
+#undef vprintf
+#define vprintf Rvprintf
+#undef errexit
+#define errexit(...) Rf_error(__VA_ARGS__)
+#undef gk_errexit
+#define gk_errexit(sig, ...) Rf_error(__VA_ARGS__)
#endif /* GKlib.h */
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/csr.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/csr.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/csr.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/csr.c 2024-08-30 23:20:09
@@ -16,7 +16,7 @@
\returns the allocated matrix. The various fields are set to NULL.
*/
/**************************************************************************/
-gk_csr_t *gk_csr_Create()
+gk_csr_t *gk_csr_Create(void)
{
gk_csr_t *mat;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/error.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/error.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/error.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/error.c 2024-08-30 23:20:09
@@ -47,6 +47,7 @@
+#if 0
/*************************************************************************/
/*! This function prints an error message and exits
*/
@@ -88,6 +89,7 @@
if (gk_exit_on_error)
raise(signum);
}
+#endif
/***************************************************************************/
@@ -95,7 +97,7 @@
of a longjmp
*/
/***************************************************************************/
-int gk_sigtrap()
+int gk_sigtrap(void)
{
if (gk_cur_jbufs+1 >= MAX_JBUFS)
return 0;
@@ -113,7 +115,7 @@
/*! This function sets the handlers for the signals to their default handlers
*/
/***************************************************************************/
-int gk_siguntrap()
+int gk_siguntrap(void)
{
if (gk_cur_jbufs == -1)
return 0;
@@ -142,7 +144,7 @@
* This function sets a number of signal handlers and sets the return point
* of a longjmp
****************************************************************************/
-void gk_SetSignalHandlers()
+void gk_SetSignalHandlers(void)
{
old_SIGMEM_handler = signal(SIGMEM, gk_NonLocalExit_Handler);
old_SIGERR_handler = signal(SIGERR, gk_NonLocalExit_Handler);
@@ -152,7 +154,7 @@
/***************************************************************************
* This function sets the handlers for the signals to their default handlers
****************************************************************************/
-void gk_UnsetSignalHandlers()
+void gk_UnsetSignalHandlers(void)
{
signal(SIGMEM, old_SIGMEM_handler);
signal(SIGERR, old_SIGERR_handler);
@@ -198,7 +200,7 @@
/*************************************************************************
* This function prints a backtrace of calling functions
**************************************************************************/
-void PrintBackTrace()
+void PrintBackTrace(void)
{
#ifdef HAVE_EXECINFO_H
void *array[10];
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_getopt.h src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/gk_getopt.h
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_getopt.h 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/gk_getopt.h 2024-08-30 23:20:09
@@ -52,11 +52,9 @@
/* Function prototypes */
-extern int gk_getopt(int __argc, char **__argv, char *__shortopts);
-extern int gk_getopt_long(int __argc, char **__argv, char *__shortopts,
- struct gk_option *__longopts, int *__longind);
-extern int gk_getopt_long_only (int __argc, char **__argv,
- char *__shortopts, struct gk_option *__longopts, int *__longind);
+int gk_getopt(int, char **, char *);
+int gk_getopt_long(int, char **, char *, struct gk_option *, int *);
+int gk_getopt_long_only (int, char **, char *, struct gk_option *, int *);
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_macros.h src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/gk_macros.h
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_macros.h 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/gk_macros.h 2024-08-30 23:20:09
@@ -21,7 +21,7 @@
#define sign(a, b) ((a >= 0 ? b : -b))
#define ONEOVERRANDMAX (1.0/(RAND_MAX+1.0))
-#define RandomInRange(u) ((int) (ONEOVERRANDMAX*(u)*rand()))
+#define RandomInRange(u) ((int) ((u) * unif_rand()) % (u))
#define gk_abs(x) ((x) >= 0 ? (x) : -(x))
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_mkpqueue.h src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/gk_mkpqueue.h
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_mkpqueue.h 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/gk_mkpqueue.h 2024-08-30 23:20:09
@@ -11,6 +11,38 @@
#ifndef _GK_MKPQUEUE_H
#define _GK_MKPQUEUE_H
+#ifndef NDEBUG
+#define DO_CHECKHEAP\
+do {\
+ gk_idx_t i, j;\
+ size_t nnodes;\
+ gk_idx_t *locator;\
+ KVT *heap;\
+\
+ heap = queue->heap;\
+ locator = queue->locator;\
+ nnodes = queue->nnodes;\
+\
+ if (nnodes == 0)\
+ return 1;\
+\
+ ASSERT(locator[heap[0].val] == 0);\
+ for (i=1; i<nnodes; i++) {\
+ ASSERT(locator[heap[i].val] == i);\
+ ASSERT(!KEY_LT(heap[i].key, heap[(i-1)/2].key));\
+ }\
+ for (i=1; i<nnodes; i++)\
+ ASSERT(!KEY_LT(heap[i].key, heap[0].key));\
+\
+ for (j=i=0; i<queue->maxnodes; i++) {\
+ if (locator[i] != -1)\
+ j++;\
+ }\
+ ASSERTP(j == nnodes, ("%jd %jd\n", (intmax_t)j, (intmax_t)nnodes));\
+} while (0)
+#else
+#define DO_CHECKHEAP
+#endif
#define GK_MKPQUEUE(FPRFX, PQT, KVT, KT, VT, KVMALLOC, KMAX, KEY_LT)\
/*************************************************************************/\
@@ -380,32 +412,7 @@
/**************************************************************************/\
int FPRFX ## CheckHeap(PQT *queue)\
{\
- gk_idx_t i, j;\
- size_t nnodes;\
- gk_idx_t *locator;\
- KVT *heap;\
-\
- heap = queue->heap;\
- locator = queue->locator;\
- nnodes = queue->nnodes;\
-\
- if (nnodes == 0)\
- return 1;\
-\
- ASSERT(locator[heap[0].val] == 0);\
- for (i=1; i<nnodes; i++) {\
- ASSERT(locator[heap[i].val] == i);\
- ASSERT(!KEY_LT(heap[i].key, heap[(i-1)/2].key));\
- }\
- for (i=1; i<nnodes; i++)\
- ASSERT(!KEY_LT(heap[i].key, heap[0].key));\
-\
- for (j=i=0; i<queue->maxnodes; i++) {\
- if (locator[i] != -1)\
- j++;\
- }\
- ASSERTP(j == nnodes, ("%jd %jd\n", (intmax_t)j, (intmax_t)nnodes));\
-\
+ DO_CHECKHEAP;\
return 1;\
}\
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_mkrandom.h src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/gk_mkrandom.h
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_mkrandom.h 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/gk_mkrandom.h 2024-08-30 23:20:09
@@ -33,7 +33,7 @@
/*************************************************************************/\
/*! Returns a random number */ \
/**************************************************************************/\
-RNGT FPRFX ## rand() \
+RNGT FPRFX ## rand(void) \
{\
if (sizeof(RNGT) <= sizeof(int32_t)) \
return (RNGT)gk_randint32(); \
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_proto.h src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/gk_proto.h
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_proto.h 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/gk_proto.h 2024-08-30 23:20:09
@@ -127,8 +127,10 @@
* error.c
*-------------------------------------------------------------*/
void gk_set_exit_on_error(int value);
+#if 0
void errexit(char *,...);
void gk_errexit(int signum, char *,...);
+#endif
// int gk_sigtrap();
int gk_sigtrap(void);
// int gk_siguntrap();
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gkregex.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/gkregex.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gkregex.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/gkregex.c 2024-08-30 23:20:09
@@ -19,7 +19,7 @@
02111-1307 USA. */
/* this is for removing a compiler warning */
-void gkfooo() { return; }
+void gkfooo(void) { return; }
#ifdef USE_GKREGEX
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/graph.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/graph.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/graph.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/graph.c 2024-08-30 23:20:09
@@ -16,7 +16,7 @@
\returns the allocated graph. The various fields are set to NULL.
*/
/**************************************************************************/
-gk_graph_t *gk_graph_Create()
+gk_graph_t *gk_graph_Create(void)
{
gk_graph_t *graph;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/mcore.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/mcore.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/mcore.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/mcore.c 2024-08-30 23:20:09
@@ -40,7 +40,7 @@
/*! This function creates an mcore. This version is used for gkmcore.
*/
/*************************************************************************/
-gk_mcore_t *gk_gkmcoreCreate()
+gk_mcore_t *gk_gkmcoreCreate(void)
{
gk_mcore_t *mcore;
@@ -71,6 +71,7 @@
if (mcore == NULL)
return;
+#ifndef NDEBUG
if (showstats)
printf("\n gk_mcore statistics\n"
" coresize: %12zu nmops: %12zu cmop: %6zu\n"
@@ -89,6 +90,7 @@
" cur_callocs: %6zu cur_hallocs: %6zu cmop: %6zu\n",
mcore->cur_callocs, mcore->cur_hallocs, mcore->cmop);
}
+#endif
gk_free((void **)&mcore->core, &mcore->mops, &mcore, LTERM);
@@ -107,6 +109,7 @@
if (mcore == NULL)
return;
+#ifndef NDEBUG
if (showstats)
printf("\n gk_mcore statistics\n"
" nmops: %12zu cmop: %6zu\n"
@@ -125,6 +128,7 @@
" cur_hallocs: %6zu cmop: %6zu\n",
mcore->cur_hallocs, mcore->cmop);
}
+#endif
free(mcore->mops);
free(mcore);
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/memory.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/memory.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/memory.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/memory.c 2024-08-30 23:20:09
@@ -96,7 +96,7 @@
/*! This function initializes tracking of heap allocations.
*/
/*************************************************************************/
-int gk_malloc_init()
+int gk_malloc_init(void)
{
#if 1
// Revised for SuiteSparse: do not create gkmcore:
@@ -152,8 +152,10 @@
ptr = (void *)malloc(nbytes);
if (ptr == NULL) {
+#ifndef NDEBUG
fprintf(stderr, " Current memory used: %10zu bytes\n", gk_GetCurMemoryUsed());
fprintf(stderr, " Maximum memory used: %10zu bytes\n", gk_GetMaxMemoryUsed());
+#endif
gk_errexit(SIGMEM, "***Memory allocation failed for %s. Requested size: %zu bytes",
msg, nbytes);
return NULL;
@@ -187,8 +189,10 @@
ptr = (void *)realloc(oldptr, nbytes);
if (ptr == NULL) {
+#ifndef NDEBUG
fprintf(stderr, " Maximum memory used: %10zu bytes\n", gk_GetMaxMemoryUsed());
fprintf(stderr, " Current memory used: %10zu bytes\n", gk_GetCurMemoryUsed());
+#endif
gk_errexit(SIGMEM, "***Memory realloc failed for %s. " "Requested size: %zu bytes",
msg, nbytes);
return NULL;
@@ -235,7 +239,7 @@
* This function returns the current ammount of dynamically allocated
* memory that is used by the system
**************************************************************************/
-size_t gk_GetCurMemoryUsed()
+size_t gk_GetCurMemoryUsed(void)
{
if (gkmcore == NULL)
return 0;
@@ -248,7 +252,7 @@
* This function returns the maximum ammount of dynamically allocated
* memory that was used by the system
**************************************************************************/
-size_t gk_GetMaxMemoryUsed()
+size_t gk_GetMaxMemoryUsed(void)
{
if (gkmcore == NULL)
return 0;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/util.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/util.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/util.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/GKlib/util.c 2024-08-30 23:20:09
@@ -9,6 +9,7 @@
#include "GKlib.h"
+#include <R_ext/Random.h>
@@ -27,11 +28,13 @@
p[i] = i;
}
+ GetRNGstate();
for (i=0; i<n/2; i++) {
v = RandomInRange(n);
u = RandomInRange(n);
gk_SWAP(p[v], p[u], tmp);
}
+ PutRNGstate();
}
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/balance.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/balance.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/balance.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/balance.c 2024-08-30 23:20:09
@@ -40,7 +40,7 @@
**************************************************************************/
void Bnd2WayBalance(ctrl_t *ctrl, graph_t *graph, real_t *ntpwgts)
{
- idx_t i, ii, j, k, kwgt, nvtxs, nbnd, nswaps, from, to, pass, me, tmp;
+ idx_t i, ii, j, k, kwgt, nvtxs, nbnd, nswaps, from, to, tmp;
idx_t *xadj, *vwgt, *adjncy, *adjwgt, *where, *id, *ed, *bndptr, *bndind, *pwgts;
idx_t *moved, *perm;
rpq_t *queue;
@@ -168,7 +168,7 @@
**************************************************************************/
void General2WayBalance(ctrl_t *ctrl, graph_t *graph, real_t *ntpwgts)
{
- idx_t i, ii, j, k, kwgt, nvtxs, nbnd, nswaps, from, to, pass, me, tmp;
+ idx_t i, ii, j, k, kwgt, nvtxs, nbnd, nswaps, from, to, tmp;
idx_t *xadj, *vwgt, *adjncy, *adjwgt, *where, *id, *ed, *bndptr, *bndind, *pwgts;
idx_t *moved, *perm;
rpq_t *queue;
@@ -280,8 +280,8 @@
**************************************************************************/
void McGeneral2WayBalance(ctrl_t *ctrl, graph_t *graph, real_t *ntpwgts)
{
- idx_t i, ii, j, k, l, kwgt, nvtxs, ncon, nbnd, nswaps, from, to, pass,
- me, limit, tmp, cnum;
+ idx_t i, ii, j, k, l, kwgt, nvtxs, ncon, nbnd, nswaps, from, to,
+ limit, tmp, cnum;
idx_t *xadj, *adjncy, *vwgt, *adjwgt, *where, *pwgts, *id, *ed, *bndptr, *bndind;
idx_t *moved, *swaps, *perm, *qnum, *qsizes;
idx_t higain, mincut, newcut, mincutorder;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/coarsen.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/coarsen.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/coarsen.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/coarsen.c 2024-08-30 23:20:09
@@ -21,7 +21,7 @@
/*************************************************************************/
graph_t *CoarsenGraph(ctrl_t *ctrl, graph_t *graph)
{
- idx_t i, eqewgts, level=0;
+ idx_t i, eqewgts;
IFSET(ctrl->dbglvl, METIS_DBG_TIME, gk_startcputimer(ctrl->CoarsenTmr));
@@ -62,7 +62,6 @@
graph = graph->coarser;
eqewgts = 0;
- level++;
ASSERT(CheckGraph(graph, 0, 1));
@@ -148,8 +147,8 @@
/**************************************************************************/
idx_t Match_RM(ctrl_t *ctrl, graph_t *graph)
{
- idx_t i, pi, ii, j, jj, jjinc, k, nvtxs, ncon, cnvtxs, maxidx, last_unmatched;
- idx_t *xadj, *vwgt, *adjncy, *adjwgt, *maxvwgt;
+ idx_t i, pi, j, k, nvtxs, ncon, cnvtxs, maxidx, last_unmatched;
+ idx_t *xadj, *vwgt, *adjncy, *maxvwgt;
idx_t *match, *cmap, *perm;
size_t nunmatched=0;
@@ -162,7 +161,6 @@
xadj = graph->xadj;
vwgt = graph->vwgt;
adjncy = graph->adjncy;
- adjwgt = graph->adjwgt;
cmap = graph->cmap;
maxvwgt = ctrl->maxvwgt;
@@ -275,7 +273,7 @@
/**************************************************************************/
idx_t Match_SHEM(ctrl_t *ctrl, graph_t *graph)
{
- idx_t i, pi, ii, j, jj, jjinc, k, nvtxs, ncon, cnvtxs, maxidx, maxwgt,
+ idx_t i, pi, j, k, nvtxs, ncon, cnvtxs, maxidx, maxwgt,
last_unmatched, avgdegree;
idx_t *xadj, *vwgt, *adjncy, *adjwgt, *maxvwgt;
idx_t *match, *cmap, *degrees, *perm, *tperm;
@@ -437,7 +435,7 @@
idx_t Match_2HopAny(ctrl_t *ctrl, graph_t *graph, idx_t *perm, idx_t *match,
idx_t cnvtxs, size_t *r_nunmatched, size_t maxdegree)
{
- idx_t i, pi, ii, j, jj, k, nvtxs;
+ idx_t i, pi, j, jj, nvtxs;
idx_t *xadj, *adjncy, *colptr, *rowind;
idx_t *cmap;
size_t nunmatched;
@@ -516,7 +514,7 @@
idx_t Match_2HopAll(ctrl_t *ctrl, graph_t *graph, idx_t *perm, idx_t *match,
idx_t cnvtxs, size_t *r_nunmatched, size_t maxdegree)
{
- idx_t i, pi, pk, ii, j, jj, k, nvtxs, mask, idegree;
+ idx_t i, pi, pk, j, jj, k, nvtxs, mask, idegree;
idx_t *xadj, *adjncy;
idx_t *cmap, *mark;
ikv_t *keys;
@@ -621,7 +619,7 @@
void CreateCoarseGraph(ctrl_t *ctrl, graph_t *graph, idx_t cnvtxs,
idx_t *match)
{
- idx_t j, jj, k, kk, l, m, istart, iend, nvtxs, nedges, ncon, cnedges,
+ idx_t j, jj, k, kk, m, istart, iend, nvtxs, nedges, ncon, cnedges,
v, u, mask, dovsize;
idx_t *xadj, *vwgt, *vsize, *adjncy, *adjwgt;
idx_t *cmap, *htable;
@@ -932,7 +930,7 @@
void CreateCoarseGraphPerm(ctrl_t *ctrl, graph_t *graph, idx_t cnvtxs,
idx_t *match, idx_t *perm)
{
- idx_t i, j, jj, k, kk, l, m, istart, iend, nvtxs, nedges, ncon, cnedges,
+ idx_t i, j, jj, k, kk, m, istart, iend, nvtxs, nedges, ncon, cnedges,
v, u, mask, dovsize;
idx_t *xadj, *vwgt, *vsize, *adjncy, *adjwgt;
idx_t *cmap, *htable;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/compress.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/compress.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/compress.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/compress.c 2024-08-30 23:20:08
@@ -151,7 +151,7 @@
idx_t *vwgt, idx_t *iperm, real_t factor)
{
idx_t i, j, k, l, nlarge, pnvtxs, pnedges;
- idx_t *pxadj, *padjncy, *padjwgt, *pvwgt;
+ idx_t *pxadj, *padjncy, *pvwgt;
idx_t *perm;
graph_t *graph=NULL;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/contig.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/contig.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/contig.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/contig.c 2024-08-30 23:20:09
@@ -32,7 +32,7 @@
idx_t FindPartitionInducedComponents(graph_t *graph, idx_t *where,
idx_t *cptr, idx_t *cind)
{
- idx_t i, ii, j, jj, k, me=0, nvtxs, first, last, nleft, ncmps;
+ idx_t i, j, k, me=0, nvtxs, first, last, nleft, ncmps;
idx_t *xadj, *adjncy;
idx_t *touched, *perm, *todo;
idx_t mustfree_ccsr=0, mustfree_where=0;
@@ -267,7 +267,7 @@
idx_t FindSepInducedComponents(ctrl_t *ctrl, graph_t *graph, idx_t *cptr,
idx_t *cind)
{
- idx_t i, j, k, nvtxs, first, last, nleft, ncmps, wgt;
+ idx_t i, j, k, nvtxs, first, last, nleft, ncmps;
idx_t *xadj, *adjncy, *where, *touched, *queue;
nvtxs = graph->nvtxs;
@@ -335,14 +335,13 @@
/*************************************************************************/
void EliminateComponents(ctrl_t *ctrl, graph_t *graph)
{
- idx_t i, ii, j, jj, k, me, nparts, nvtxs, ncon, ncmps, other,
+ idx_t i, ii, j, jj, me, nparts, nvtxs, ncon, ncmps,
ncand, target;
idx_t *xadj, *adjncy, *vwgt, *adjwgt, *where, *pwgts;
idx_t *cptr, *cind, *cpvec, *pcptr, *pcind, *cwhere;
idx_t cid, bestcid, *cwgt, *bestcwgt;
idx_t ntodo, oldntodo, *todo;
rkv_t *cand;
- real_t *tpwgts;
idx_t *vmarker=NULL, *pmarker=NULL, *modind=NULL; /* volume specific work arrays */
WCOREPUSH;
@@ -358,7 +357,6 @@
pwgts = graph->pwgts;
nparts = ctrl->nparts;
- tpwgts = ctrl->tpwgts;
cptr = iwspacemalloc(ctrl, nvtxs+1);
cind = iwspacemalloc(ctrl, nvtxs);
@@ -531,12 +529,11 @@
void MoveGroupContigForCut(ctrl_t *ctrl, graph_t *graph, idx_t to, idx_t gid,
idx_t *ptr, idx_t *ind)
{
- idx_t i, ii, iii, j, jj, k, l, nvtxs, nbnd, from, me;
+ idx_t i, ii, iii, j, k, nbnd, from, me;
idx_t *xadj, *adjncy, *adjwgt, *where, *bndptr, *bndind;
ckrinfo_t *myrinfo;
cnbr_t *mynbrs;
- nvtxs = graph->nvtxs;
xadj = graph->xadj;
adjncy = graph->adjncy;
adjwgt = graph->adjwgt;
@@ -602,12 +599,11 @@
idx_t *ptr, idx_t *ind, idx_t *vmarker, idx_t *pmarker,
idx_t *modind)
{
- idx_t i, ii, iii, j, jj, k, l, nvtxs, from, me, other, xgain;
+ idx_t i, ii, iii, j, k, l, from, other, xgain;
idx_t *xadj, *vsize, *adjncy, *where;
vkrinfo_t *myrinfo, *orinfo;
vnbr_t *mynbrs, *onbrs;
- nvtxs = graph->nvtxs;
xadj = graph->xadj;
vsize = graph->vsize;
adjncy = graph->adjncy;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/debug.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/debug.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/debug.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/debug.c 2024-08-30 23:20:09
@@ -47,7 +47,7 @@
/*************************************************************************/
idx_t ComputeVolume(graph_t *graph, idx_t *where)
{
- idx_t i, j, k, me, nvtxs, nparts, totalv;
+ idx_t i, j, k, nvtxs, nparts, totalv;
idx_t *xadj, *adjncy, *vsize, *marker;
@@ -106,7 +106,9 @@
maxcut = cuts[iargmax(nparts, cuts)];
+#ifndef NDEBUG
printf("%zu => %"PRIDX"\n", iargmax(nparts, cuts), maxcut);
+#endif
gk_free((void **)&cuts, LTERM);
@@ -120,6 +122,7 @@
/*************************************************************************/
idx_t CheckBnd(graph_t *graph)
{
+#ifndef NDEBUG
idx_t i, j, nvtxs, nbnd;
idx_t *xadj, *adjncy, *where, *bndptr, *bndind;
@@ -145,6 +148,7 @@
}
ASSERTP(nbnd == graph->nbnd, ("%"PRIDX" %"PRIDX"\n", nbnd, graph->nbnd));
+#endif
return 1;
}
@@ -157,6 +161,7 @@
/*************************************************************************/
idx_t CheckBnd2(graph_t *graph)
{
+#ifndef NDEBUG
idx_t i, j, nvtxs, nbnd, id, ed;
idx_t *xadj, *adjncy, *where, *bndptr, *bndind;
@@ -183,6 +188,7 @@
}
ASSERTP(nbnd == graph->nbnd, ("%"PRIDX" %"PRIDX"\n", nbnd, graph->nbnd));
+#endif
return 1;
}
@@ -194,6 +200,7 @@
/*************************************************************************/
idx_t CheckNodeBnd(graph_t *graph, idx_t onbnd)
{
+#ifndef NDEBUG
idx_t i, j, nvtxs, nbnd;
idx_t *xadj, *adjncy, *where, *bndptr, *bndind;
@@ -219,6 +226,7 @@
ASSERTP(bndptr[i] != -1, ("%"PRIDX" %"PRIDX"\n", i, bndptr[i]));
}
}
+#endif
return 1;
}
@@ -231,6 +239,7 @@
/*************************************************************************/
idx_t CheckRInfo(ctrl_t *ctrl, ckrinfo_t *rinfo)
{
+#ifndef NDEBUG
idx_t i, j;
cnbr_t *nbrs;
@@ -242,6 +251,7 @@
("%"PRIDX" %"PRIDX" %"PRIDX" %"PRIDX"\n",
i, j, nbrs[i].pid, nbrs[j].pid));
}
+#endif
return 1;
}
@@ -254,15 +264,14 @@
/*************************************************************************/
idx_t CheckNodePartitionParams(graph_t *graph)
{
- idx_t i, j, k, l, nvtxs, me, other;
- idx_t *xadj, *adjncy, *adjwgt, *vwgt, *where;
+ idx_t i, j, nvtxs, me, other;
+ idx_t *xadj, *adjncy, *vwgt, *where;
idx_t edegrees[2], pwgts[3];
nvtxs = graph->nvtxs;
xadj = graph->xadj;
vwgt = graph->vwgt;
adjncy = graph->adjncy;
- adjwgt = graph->adjwgt;
where = graph->where;
/*------------------------------------------------------------
@@ -308,6 +317,7 @@
/*************************************************************************/
idx_t IsSeparable(graph_t *graph)
{
+#ifndef NDEBUG
idx_t i, j, nvtxs, other;
idx_t *xadj, *adjncy, *where;
@@ -327,6 +337,7 @@
xadj[adjncy[j]+1]-xadj[adjncy[j]]));
}
}
+#endif
return 1;
}
@@ -338,8 +349,8 @@
/*************************************************************************/
void CheckKWayVolPartitionParams(ctrl_t *ctrl, graph_t *graph)
{
- idx_t i, ii, j, k, kk, l, nvtxs, nbnd, mincut, minvol, me, other, pid;
- idx_t *xadj, *vsize, *adjncy, *pwgts, *where, *bndind, *bndptr;
+ idx_t i, ii, j, k, kk, nvtxs, me, other, pid;
+ idx_t *xadj, *vsize, *adjncy, *where;
vkrinfo_t *rinfo, *myrinfo, *orinfo, tmprinfo;
vnbr_t *mynbrs, *onbrs, *tmpnbrs;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/fm.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/fm.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/fm.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/fm.c 2024-08-30 23:20:09
@@ -28,7 +28,7 @@
/*************************************************************************/
void FM_2WayCutRefine(ctrl_t *ctrl, graph_t *graph, real_t *ntpwgts, idx_t niter)
{
- idx_t i, ii, j, k, kwgt, nvtxs, nbnd, nswaps, from, to, pass, me, limit, tmp;
+ idx_t i, ii, j, k, kwgt, nvtxs, nbnd, nswaps, from, to, pass, limit, tmp;
idx_t *xadj, *vwgt, *adjncy, *adjwgt, *where, *id, *ed, *bndptr, *bndind, *pwgts;
idx_t *moved, *swaps, *perm;
rpq_t *queues[2];
@@ -207,7 +207,7 @@
void FM_Mc2WayCutRefine(ctrl_t *ctrl, graph_t *graph, real_t *ntpwgts, idx_t niter)
{
idx_t i, ii, j, k, l, kwgt, nvtxs, ncon, nbnd, nswaps, from, to, pass,
- me, limit, tmp, cnum;
+ limit, tmp, cnum;
idx_t *xadj, *adjncy, *vwgt, *adjwgt, *pwgts, *where, *id, *ed,
*bndptr, *bndind;
idx_t *moved, *swaps, *perm, *qnum;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/graph.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/graph.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/graph.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/graph.c 2024-08-30 23:20:09
@@ -17,8 +17,7 @@
graph_t *SetupGraph(ctrl_t *ctrl, idx_t nvtxs, idx_t ncon, idx_t *xadj,
idx_t *adjncy, idx_t *vwgt, idx_t *vsize, idx_t *adjwgt)
{
- idx_t i, j, k, sum;
- real_t *nvwgt;
+ idx_t i, j;
graph_t *graph;
/* allocate the graph and fill in the fields */
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/initpart.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/initpart.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/initpart.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/initpart.c 2024-08-30 23:20:09
@@ -94,7 +94,7 @@
break;
default:
- gk_errexit(SIGERR, "Unkown iptype of %"PRIDX"\n", ctrl->iptype);
+ gk_errexit(SIGERR, "Unkown iptype of %"PRIDX"\n", (idx_t) ctrl->iptype);
}
IFSET(ctrl->dbglvl, METIS_DBG_IPART, printf("Initial Sep: %"PRIDX"\n", graph->mincut));
@@ -114,18 +114,15 @@
void RandomBisection(ctrl_t *ctrl, graph_t *graph, real_t *ntpwgts,
idx_t niparts)
{
- idx_t i, ii, j, k, nvtxs, pwgts[2], zeromaxpwgt, from, me,
- bestcut=0, icut, mincut, inbfs;
- idx_t *xadj, *vwgt, *adjncy, *adjwgt, *where;
+ idx_t i, ii, nvtxs, pwgts[2], zeromaxpwgt,
+ bestcut=0, inbfs;
+ idx_t *vwgt, *where;
idx_t *perm, *bestwhere;
WCOREPUSH;
nvtxs = graph->nvtxs;
- xadj = graph->xadj;
vwgt = graph->vwgt;
- adjncy = graph->adjncy;
- adjwgt = graph->adjwgt;
Allocate2WayPartitionMemory(ctrl, graph);
where = graph->where;
@@ -191,9 +188,9 @@
{
idx_t i, j, k, nvtxs, drain, nleft, first, last,
pwgts[2], oneminpwgt, onemaxpwgt,
- from, me, bestcut=0, icut, mincut, inbfs;
- idx_t *xadj, *vwgt, *adjncy, *adjwgt, *where;
- idx_t *queue, *touched, *gain, *bestwhere;
+ bestcut=0, inbfs;
+ idx_t *xadj, *vwgt, *adjncy, *where;
+ idx_t *queue, *touched, *bestwhere;
WCOREPUSH;
@@ -201,7 +198,6 @@
xadj = graph->xadj;
vwgt = graph->vwgt;
adjncy = graph->adjncy;
- adjwgt = graph->adjwgt;
Allocate2WayPartitionMemory(ctrl, graph);
where = graph->where;
@@ -325,7 +321,7 @@
void McRandomBisection(ctrl_t *ctrl, graph_t *graph, real_t *ntpwgts,
idx_t niparts)
{
- idx_t i, ii, j, k, nvtxs, ncon, from, bestcut=0, mincut, inbfs, qnum;
+ idx_t i, ii, nvtxs, ncon, bestcut=0, inbfs, qnum;
idx_t *bestwhere, *where, *perm, *counts;
idx_t *vwgt;
@@ -385,7 +381,7 @@
void McGrowBisection(ctrl_t *ctrl, graph_t *graph, real_t *ntpwgts,
idx_t niparts)
{
- idx_t i, j, k, nvtxs, ncon, from, bestcut=0, mincut, inbfs;
+ idx_t nvtxs, bestcut=0, inbfs;
idx_t *bestwhere, *where;
WCOREPUSH;
@@ -434,9 +430,9 @@
idx_t niparts)
{
idx_t i, j, k, nvtxs, drain, nleft, first, last, pwgts[2], oneminpwgt,
- onemaxpwgt, from, me, bestcut=0, icut, mincut, inbfs;
- idx_t *xadj, *vwgt, *adjncy, *adjwgt, *where, *bndind;
- idx_t *queue, *touched, *gain, *bestwhere;
+ onemaxpwgt, bestcut=0, inbfs;
+ idx_t *xadj, *vwgt, *adjncy, *where, *bndind;
+ idx_t *queue, *touched, *bestwhere;
WCOREPUSH;
@@ -444,7 +440,6 @@
xadj = graph->xadj;
vwgt = graph->vwgt;
adjncy = graph->adjncy;
- adjwgt = graph->adjwgt;
bestwhere = iwspacemalloc(ctrl, nvtxs);
queue = iwspacemalloc(ctrl, nvtxs);
@@ -570,7 +565,7 @@
void GrowBisectionNode2(ctrl_t *ctrl, graph_t *graph, real_t *ntpwgts,
idx_t niparts)
{
- idx_t i, j, k, nvtxs, bestcut=0, mincut, inbfs;
+ idx_t i, j, nvtxs, bestcut=0, inbfs;
idx_t *xadj, *where, *bndind, *bestwhere;
WCOREPUSH;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/kmetis.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/kmetis.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/kmetis.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/kmetis.c 2024-08-30 23:20:08
@@ -102,10 +102,9 @@
/*************************************************************************/
idx_t MlevelKWayPartitioning(ctrl_t *ctrl, graph_t *graph, idx_t *part)
{
- idx_t i, j, objval=0, curobj=0, bestobj=0;
+ idx_t i, objval=0, curobj=0, bestobj=0;
real_t curbal=0.0, bestbal=0.0;
graph_t *cgraph;
- int status;
for (i=0; i<ctrl->ncuts; i++) {
@@ -171,7 +170,10 @@
/*************************************************************************/
void InitKWayPartitioning(ctrl_t *ctrl, graph_t *graph)
{
- idx_t i, ntrials, options[METIS_NOPTIONS], curobj=0, bestobj=0;
+ idx_t i, options[METIS_NOPTIONS], curobj=0;
+#ifdef XXX
+ idx_t ntrials, bestobj=0;
+#endif
idx_t *bestwhere=NULL;
real_t *ubvec=NULL;
int status;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/kwayfm.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/kwayfm.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/kwayfm.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/kwayfm.c 2024-08-30 23:20:09
@@ -61,12 +61,12 @@
real_t ffactor, idx_t omode)
{
/* Common variables to all types of kway-refinement/balancing routines */
- idx_t i, ii, iii, j, k, l, pass, nvtxs, nparts, gain;
+ idx_t i, ii, iii, j, k, pass, nvtxs, nparts, gain;
idx_t from, me, to, oldcut, vwgt;
idx_t *xadj, *adjncy, *adjwgt;
idx_t *where, *pwgts, *perm, *bndptr, *bndind, *minwgt, *maxwgt, *itpwgts;
idx_t nmoved, nupd, *vstatus, *updptr, *updind;
- idx_t maxndoms, *safetos=NULL, *nads=NULL, *doms=NULL, **adids=NULL, **adwgts=NULL;
+ idx_t maxndoms, *safetos=NULL, *nads=NULL, *doms=NULL, **adids=NULL;
idx_t *bfslvl=NULL, *bfsind=NULL, *bfsmrk=NULL;
idx_t bndtype = (omode == OMODE_REFINE ? BNDTYPE_REFINE : BNDTYPE_BALANCE);
@@ -118,7 +118,6 @@
nads = ctrl->nads;
adids = ctrl->adids;
- adwgts = ctrl->adwgts;
doms = iset(nparts, 0, ctrl->pvec1);
}
@@ -371,12 +370,12 @@
real_t ffactor, idx_t omode)
{
/* Common variables to all types of kway-refinement/balancing routines */
- idx_t i, ii, iii, j, k, l, pass, nvtxs, nparts, gain;
+ idx_t i, ii, iii, j, k, pass, nvtxs, nparts, gain;
idx_t from, me, to, oldcut, vwgt;
idx_t *xadj, *adjncy;
- idx_t *where, *pwgts, *perm, *bndptr, *bndind, *minwgt, *maxwgt, *itpwgts;
+ idx_t *where, *pwgts, *perm, *bndind, *minwgt, *maxwgt, *itpwgts;
idx_t nmoved, nupd, *vstatus, *updptr, *updind;
- idx_t maxndoms, *safetos=NULL, *nads=NULL, *doms=NULL, **adids=NULL, **adwgts=NULL;
+ idx_t maxndoms, *safetos=NULL, *nads=NULL, *doms=NULL, **adids=NULL;
idx_t *bfslvl=NULL, *bfsind=NULL, *bfsmrk=NULL;
idx_t bndtype = (omode == OMODE_REFINE ? BNDTYPE_REFINE : BNDTYPE_BALANCE);
@@ -393,7 +392,6 @@
nvtxs = graph->nvtxs;
xadj = graph->xadj;
adjncy = graph->adjncy;
- bndptr = graph->bndptr;
bndind = graph->bndind;
where = graph->where;
pwgts = graph->pwgts;
@@ -425,7 +423,6 @@
nads = ctrl->nads;
adids = ctrl->adids;
- adwgts = ctrl->adwgts;
doms = iset(nparts, 0, ctrl->pvec1);
}
@@ -685,12 +682,12 @@
real_t ffactor, idx_t omode)
{
/* Common variables to all types of kway-refinement/balancing routines */
- idx_t i, ii, iii, j, k, l, pass, nvtxs, ncon, nparts, gain;
+ idx_t i, ii, iii, j, k, pass, nvtxs, ncon, nparts, gain;
idx_t from, me, to, cto, oldcut;
idx_t *xadj, *vwgt, *adjncy, *adjwgt;
idx_t *where, *pwgts, *perm, *bndptr, *bndind, *minwgt, *maxwgt;
idx_t nmoved, nupd, *vstatus, *updptr, *updind;
- idx_t maxndoms, *safetos=NULL, *nads=NULL, *doms=NULL, **adids=NULL, **adwgts=NULL;
+ idx_t maxndoms, *safetos=NULL, *nads=NULL, *doms=NULL, **adids=NULL;
idx_t *bfslvl=NULL, *bfsind=NULL, *bfsmrk=NULL;
idx_t bndtype = (omode == OMODE_REFINE ? BNDTYPE_REFINE : BNDTYPE_BALANCE);
real_t *ubfactors, *pijbm;
@@ -765,7 +762,6 @@
nads = ctrl->nads;
adids = ctrl->adids;
- adwgts = ctrl->adwgts;
doms = iset(nparts, 0, ctrl->pvec1);
}
@@ -1027,12 +1023,12 @@
real_t ffactor, idx_t omode)
{
/* Common variables to all types of kway-refinement/balancing routines */
- idx_t i, ii, iii, j, k, l, pass, nvtxs, ncon, nparts, gain;
+ idx_t i, ii, iii, j, k, pass, nvtxs, ncon, nparts, gain;
idx_t from, me, to, cto, oldcut;
idx_t *xadj, *vwgt, *adjncy;
- idx_t *where, *pwgts, *perm, *bndptr, *bndind, *minwgt, *maxwgt;
+ idx_t *where, *pwgts, *perm, *bndind, *minwgt, *maxwgt;
idx_t nmoved, nupd, *vstatus, *updptr, *updind;
- idx_t maxndoms, *safetos=NULL, *nads=NULL, *doms=NULL, **adids=NULL, **adwgts=NULL;
+ idx_t maxndoms, *safetos=NULL, *nads=NULL, *doms=NULL, **adids=NULL;
idx_t *bfslvl=NULL, *bfsind=NULL, *bfsmrk=NULL;
idx_t bndtype = (omode == OMODE_REFINE ? BNDTYPE_REFINE : BNDTYPE_BALANCE);
real_t *ubfactors, *pijbm;
@@ -1053,7 +1049,6 @@
xadj = graph->xadj;
vwgt = graph->vwgt;
adjncy = graph->adjncy;
- bndptr = graph->bndptr;
bndind = graph->bndind;
where = graph->where;
pwgts = graph->pwgts;
@@ -1104,7 +1099,6 @@
nads = ctrl->nads;
adids = ctrl->adids;
- adwgts = ctrl->adwgts;
doms = iset(nparts, 0, ctrl->pvec1);
}
@@ -1462,7 +1456,7 @@
idx_t *updind, idx_t bndtype, idx_t *vmarker, idx_t *pmarker,
idx_t *modind)
{
- idx_t i, ii, iii, j, jj, k, kk, l, u, nmod, other, me, myidx;
+ idx_t i, ii, iii, j, jj, k, kk, u, nmod, other, me, myidx;
idx_t *xadj, *vsize, *adjncy, *where;
vkrinfo_t *myrinfo, *orinfo;
vnbr_t *mynbrs, *onbrs;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/kwayrefine.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/kwayrefine.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/kwayrefine.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/kwayrefine.c 2024-08-30 23:20:08
@@ -148,7 +148,7 @@
/**************************************************************************/
void ComputeKWayPartitionParams(ctrl_t *ctrl, graph_t *graph)
{
- idx_t i, j, k, l, nvtxs, ncon, nparts, nbnd, mincut, me, other;
+ idx_t i, j, k, nvtxs, ncon, nparts, nbnd, mincut, me, other;
idx_t *xadj, *vwgt, *adjncy, *adjwgt, *pwgts, *where, *bndind, *bndptr;
nparts = ctrl->nparts;
@@ -561,8 +561,8 @@
/*************************************************************************/
void ComputeKWayVolGains(ctrl_t *ctrl, graph_t *graph)
{
- idx_t i, ii, j, k, l, nvtxs, nparts, me, other, pid;
- idx_t *xadj, *vsize, *adjncy, *adjwgt, *where,
+ idx_t i, ii, j, k, nvtxs, nparts, me, other;
+ idx_t *xadj, *vsize, *adjncy, *where,
*bndind, *bndptr, *ophtable;
vkrinfo_t *myrinfo, *orinfo;
vnbr_t *mynbrs, *onbrs;
@@ -575,7 +575,6 @@
xadj = graph->xadj;
vsize = graph->vsize;
adjncy = graph->adjncy;
- adjwgt = graph->adjwgt;
where = graph->where;
bndind = graph->bndind;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/minconn.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/minconn.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/minconn.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/minconn.c 2024-08-30 23:20:09
@@ -18,16 +18,13 @@
void ComputeSubDomainGraph(ctrl_t *ctrl, graph_t *graph)
{
idx_t i, ii, j, pid, other, nparts, nvtxs, nnbrs;
- idx_t *xadj, *adjncy, *adjwgt, *where;
+ idx_t *where;
idx_t *pptr, *pind;
idx_t nads=0, *vadids, *vadwgts;
WCOREPUSH;
nvtxs = graph->nvtxs;
- xadj = graph->xadj;
- adjncy = graph->adjncy;
- adjwgt = graph->adjwgt;
where = graph->where;
nparts = ctrl->nparts;
@@ -264,10 +261,12 @@
avg = total/nparts;
max = nads[iargmax(nparts, nads)];
+#ifndef NDEBUG
IFSET(ctrl->dbglvl, METIS_DBG_CONNINFO,
printf("Adjacent Subdomain Stats: Total: %3"PRIDX", "
"Max: %3"PRIDX"[%zu], Avg: %3"PRIDX"\n",
total, max, iargmax(nparts, nads), avg));
+#endif
if (max < badfactor*avg)
break;
@@ -477,12 +476,11 @@
void MoveGroupMinConnForCut(ctrl_t *ctrl, graph_t *graph, idx_t to, idx_t nind,
idx_t *ind)
{
- idx_t i, ii, j, jj, k, l, nvtxs, nbnd, from, me;
+ idx_t i, ii, j, k, nbnd, from, me;
idx_t *xadj, *adjncy, *adjwgt, *where, *bndptr, *bndind;
ckrinfo_t *myrinfo;
cnbr_t *mynbrs;
- nvtxs = graph->nvtxs;
xadj = graph->xadj;
adjncy = graph->adjncy;
adjwgt = graph->adjwgt;
@@ -561,12 +559,11 @@
void MoveGroupMinConnForVol(ctrl_t *ctrl, graph_t *graph, idx_t to, idx_t nind,
idx_t *ind, idx_t *vmarker, idx_t *pmarker, idx_t *modind)
{
- idx_t i, ii, j, jj, k, l, nvtxs, from, me, other, xgain, ewgt;
+ idx_t i, ii, j, k, l, from, me, other, xgain, ewgt;
idx_t *xadj, *vsize, *adjncy, *where;
vkrinfo_t *myrinfo, *orinfo;
vnbr_t *mynbrs, *onbrs;
- nvtxs = graph->nvtxs;
xadj = graph->xadj;
vsize = graph->vsize;
adjncy = graph->adjncy;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/ometis.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/ometis.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/ometis.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/ometis.c 2024-08-30 23:20:08
@@ -48,7 +48,6 @@
graph_t *graph=NULL;
ctrl_t *ctrl;
idx_t *cptr, *cind, *piperm;
- int numflag = 0;
/* set up malloc cleaning code and signal catchers */
if (!gk_malloc_init())
@@ -183,12 +182,10 @@
void MlevelNestedDissection(ctrl_t *ctrl, graph_t *graph, idx_t *order,
idx_t lastvtx)
{
- idx_t i, j, nvtxs, nbnd;
+ idx_t i, nbnd;
idx_t *label, *bndind;
graph_t *lgraph, *rgraph;
- nvtxs = graph->nvtxs;
-
MlevelNodeBisectionMultiple(ctrl, graph);
IFSET(ctrl->dbglvl, METIS_DBG_SEPINFO,
@@ -236,7 +233,7 @@
void MlevelNestedDissectionCC(ctrl_t *ctrl, graph_t *graph, idx_t *order,
idx_t lastvtx)
{
- idx_t i, j, nvtxs, nbnd, ncmps, rnvtxs, snvtxs;
+ idx_t i, nvtxs, nbnd, ncmps, rnvtxs, snvtxs;
idx_t *label, *bndind;
idx_t *cptr, *cind;
graph_t **sgraphs;
@@ -423,7 +420,7 @@
graph_t **r_rgraph)
{
idx_t i, ii, j, k, l, istart, iend, mypart, nvtxs, snvtxs[3], snedges[3];
- idx_t *xadj, *vwgt, *adjncy, *adjwgt, *label, *where, *bndptr, *bndind;
+ idx_t *xadj, *vwgt, *adjncy, *label, *where, *bndptr, *bndind;
idx_t *sxadj[2], *svwgt[2], *sadjncy[2], *sadjwgt[2], *slabel[2];
idx_t *rename;
idx_t *auxadjncy;
@@ -437,7 +434,6 @@
xadj = graph->xadj;
vwgt = graph->vwgt;
adjncy = graph->adjncy;
- adjwgt = graph->adjwgt;
label = graph->label;
where = graph->where;
bndptr = graph->bndptr;
@@ -552,8 +548,8 @@
graph_t **SplitGraphOrderCC(ctrl_t *ctrl, graph_t *graph, idx_t ncmps,
idx_t *cptr, idx_t *cind)
{
- idx_t i, ii, iii, j, k, l, istart, iend, mypart, nvtxs, snvtxs, snedges;
- idx_t *xadj, *vwgt, *adjncy, *adjwgt, *label, *where, *bndptr, *bndind;
+ idx_t i, ii, iii, j, k, l, istart, iend, nvtxs, snvtxs, snedges;
+ idx_t *xadj, *vwgt, *adjncy, *label, *where, *bndptr, *bndind;
idx_t *sxadj, *svwgt, *sadjncy, *sadjwgt, *slabel;
idx_t *rename;
idx_t *auxadjncy;
@@ -567,7 +563,6 @@
xadj = graph->xadj;
vwgt = graph->vwgt;
adjncy = graph->adjncy;
- adjwgt = graph->adjwgt;
label = graph->label;
where = graph->where;
bndptr = graph->bndptr;
@@ -654,7 +649,7 @@
/*************************************************************************/
void MMDOrder(ctrl_t *ctrl, graph_t *graph, idx_t *order, idx_t lastvtx)
{
- idx_t i, j, k, nvtxs, nofsub, firstvtx;
+ idx_t i, k, nvtxs, nofsub, firstvtx;
idx_t *xadj, *adjncy, *label;
idx_t *perm, *iperm, *head, *qsize, *list, *marker;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/parmetis.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/parmetis.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/parmetis.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/parmetis.c 2024-08-30 23:20:08
@@ -105,7 +105,7 @@
void MlevelNestedDissectionP(ctrl_t *ctrl, graph_t *graph, idx_t *order,
idx_t lastvtx, idx_t npes, idx_t cpos, idx_t *sizes)
{
- idx_t i, j, nvtxs, nbnd;
+ idx_t i, nvtxs, nbnd;
idx_t *label, *bndind;
graph_t *lgraph, *rgraph;
@@ -161,7 +161,6 @@
int METIS_ComputeVertexSeparator(idx_t *nvtxs, idx_t *xadj, idx_t *adjncy,
idx_t *vwgt, idx_t *options, idx_t *r_sepsize, idx_t *part)
{
- idx_t i, j;
graph_t *graph;
ctrl_t *ctrl;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/pmetis.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/pmetis.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/pmetis.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/pmetis.c 2024-08-30 23:20:09
@@ -157,7 +157,7 @@
idx_t MlevelRecursiveBisection(ctrl_t *ctrl, graph_t *graph, idx_t nparts,
idx_t *part, real_t *tpwgts, idx_t fpart)
{
- idx_t i, j, nvtxs, ncon, objval;
+ idx_t i, nvtxs, ncon, objval;
idx_t *label, *where;
graph_t *lgraph, *rgraph;
real_t wsum, *tpwgts2;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/separator.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/separator.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/separator.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/separator.c 2024-08-30 23:20:08
@@ -20,7 +20,7 @@
**************************************************************************/
void ConstructSeparator(ctrl_t *ctrl, graph_t *graph)
{
- idx_t i, j, k, nvtxs, nbnd;
+ idx_t i, j, nvtxs, nbnd;
idx_t *xadj, *where, *bndind;
WCOREPUSH;
@@ -70,7 +70,10 @@
{
idx_t i, ii, j, jj, k, l, nvtxs, nbnd, bnvtxs[3], bnedges[2], csize;
idx_t *xadj, *adjncy, *bxadj, *badjncy;
- idx_t *where, *bndind, *bndptr, *vmap, *ivmap, *cover;
+ idx_t *where, *bndind, *vmap, *ivmap, *cover;
+#ifndef NDEBUG
+ idx_t *bndptr;
+#endif
WCOREPUSH;
@@ -80,7 +83,9 @@
nbnd = graph->nbnd;
bndind = graph->bndind;
+#ifndef NDEBUG
bndptr = graph->bndptr;
+#endif
where = graph->where;
vmap = iwspacemalloc(ctrl, nvtxs);
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/sfm.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/sfm.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/sfm.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/sfm.c 2024-08-30 23:20:08
@@ -476,7 +476,7 @@
void FM_2WayNodeBalance(ctrl_t *ctrl, graph_t *graph)
{
idx_t i, ii, j, k, jj, kk, nvtxs, nbnd, nswaps, gain;
- idx_t badmaxpwgt, higain, oldgain, pass, to, other;
+ idx_t badmaxpwgt, higain, oldgain, to, other;
idx_t *xadj, *vwgt, *adjncy, *where, *pwgts, *edegrees, *bndind, *bndptr;
idx_t *perm, *moved;
rpq_t *queue;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/srefine.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/srefine.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/srefine.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/srefine.c 2024-08-30 23:20:09
@@ -136,7 +136,7 @@
/*************************************************************************/
void Project2WayNodePartition(ctrl_t *ctrl, graph_t *graph)
{
- idx_t i, j, nvtxs;
+ idx_t i, nvtxs;
idx_t *cmap, *where, *cwhere;
graph_t *cgraph;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/stat.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/stat.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/stat.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/stat.c 2024-08-30 23:20:09
@@ -20,8 +20,8 @@
**************************************************************************/
void ComputePartitionInfoBipartite(graph_t *graph, idx_t nparts, idx_t *where)
{
- idx_t i, j, k, nvtxs, ncon, mustfree=0;
- idx_t *xadj, *adjncy, *vwgt, *vsize, *adjwgt, *kpwgts, *tmpptr;
+ idx_t i, j, nvtxs, ncon, mustfree=0;
+ idx_t *xadj, *adjncy, *vwgt, *vsize, *adjwgt, *kpwgts;
idx_t *padjncy, *padjwgt, *padjcut;
nvtxs = graph->nvtxs;
@@ -126,7 +126,6 @@
{
idx_t i, j, nvtxs, ncon;
idx_t *kpwgts, *vwgt;
- real_t balance;
nvtxs = graph->nvtxs;
ncon = graph->ncon;
diff -ruN src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/wspace.c src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/wspace.c
--- src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/wspace.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/SuiteSparse_metis/libmetis/wspace.c 2024-08-30 23:20:08
@@ -81,12 +81,14 @@
{
gk_mcoreDestroy(&ctrl->mcore, ctrl->dbglvl&METIS_DBG_INFO);
+#ifndef NDEBUG
IFSET(ctrl->dbglvl, METIS_DBG_INFO,
printf(" nbrpool statistics\n"
" nbrpoolsize: %12zu nbrpoolcpos: %12zu\n"
" nbrpoolreallocs: %12zu\n\n",
ctrl->nbrpoolsize, ctrl->nbrpoolcpos,
ctrl->nbrpoolreallocs));
+#endif
gk_free((void **)&ctrl->cnbrpool, &ctrl->vnbrpool, LTERM);
ctrl->nbrpoolsize = 0;
diff -ruN src/SuiteSparse/CHOLMOD/Supernodal/cholmod_super_numeric.c src/SuiteSparse-patched/CHOLMOD/Supernodal/cholmod_super_numeric.c
--- src/SuiteSparse/CHOLMOD/Supernodal/cholmod_super_numeric.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Supernodal/cholmod_super_numeric.c 2024-08-30 22:55:25
@@ -82,15 +82,6 @@
#define ZOMPLEX
#include "t_cholmod_super_numeric_worker.c"
-#undef DOUBLE
-#define SINGLE
-#define REAL
-#include "t_cholmod_super_numeric_worker.c"
-#define COMPLEX
-#include "t_cholmod_super_numeric_worker.c"
-#define ZOMPLEX
-#include "t_cholmod_super_numeric_worker.c"
-
//------------------------------------------------------------------------------
// cholmod_super_numeric
//------------------------------------------------------------------------------
@@ -290,23 +281,19 @@
// supernodal numerical factorization, using template routine
//--------------------------------------------------------------------------
- float s_beta [2] ;
- s_beta [0] = (float) beta [0] ;
- s_beta [1] = (float) beta [1] ;
-
switch ((A->xtype + A->dtype) % 8)
{
case CHOLMOD_REAL + CHOLMOD_SINGLE:
- ok = rs_cholmod_super_numeric_worker (A, F, s_beta, L, C, Common) ;
+ ok = FALSE ;
break ;
case CHOLMOD_COMPLEX + CHOLMOD_SINGLE:
- ok = cs_cholmod_super_numeric_worker (A, F, s_beta, L, C, Common) ;
+ ok = FALSE ;
break ;
case CHOLMOD_ZOMPLEX + CHOLMOD_SINGLE:
// A is zomplex, but L is complex
- ok = zs_cholmod_super_numeric_worker (A, F, s_beta, L, C, Common) ;
+ ok = FALSE ;
break ;
case CHOLMOD_REAL + CHOLMOD_DOUBLE:
diff -ruN src/SuiteSparse/CHOLMOD/Supernodal/cholmod_super_solve.c src/SuiteSparse-patched/CHOLMOD/Supernodal/cholmod_super_solve.c
--- src/SuiteSparse/CHOLMOD/Supernodal/cholmod_super_solve.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Supernodal/cholmod_super_solve.c 2024-08-30 22:55:25
@@ -30,13 +30,6 @@
#define COMPLEX
#include "t_cholmod_super_solve_worker.c"
-#undef DOUBLE
-#define SINGLE
-#define REAL
-#include "t_cholmod_super_solve_worker.c"
-#define COMPLEX
-#include "t_cholmod_super_solve_worker.c"
-
//------------------------------------------------------------------------------
// cholmod_super_lsolve: solve x=L\b
//------------------------------------------------------------------------------
@@ -114,11 +107,11 @@
switch ((L->xtype + L->dtype) % 8)
{
case CHOLMOD_REAL + CHOLMOD_SINGLE:
- rs_cholmod_super_lsolve_worker (L, X, E, Common) ;
+ return FALSE ;
break ;
case CHOLMOD_COMPLEX + CHOLMOD_SINGLE:
- cs_cholmod_super_lsolve_worker (L, X, E, Common) ;
+ return FALSE ;
break ;
case CHOLMOD_REAL + CHOLMOD_DOUBLE:
@@ -215,11 +208,11 @@
switch ((L->xtype + L->dtype) % 8)
{
case CHOLMOD_REAL + CHOLMOD_SINGLE:
- rs_cholmod_super_ltsolve_worker (L, X, E, Common) ;
+ return FALSE ;
break ;
case CHOLMOD_COMPLEX + CHOLMOD_SINGLE:
- cs_cholmod_super_ltsolve_worker (L, X, E, Common) ;
+ return FALSE ;
break ;
case CHOLMOD_REAL + CHOLMOD_DOUBLE:
diff -ruN src/SuiteSparse/CHOLMOD/Supernodal/cholmod_super_symbolic.c src/SuiteSparse-patched/CHOLMOD/Supernodal/cholmod_super_symbolic.c
--- src/SuiteSparse/CHOLMOD/Supernodal/cholmod_super_symbolic.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Supernodal/cholmod_super_symbolic.c 2024-08-30 22:55:25
@@ -173,11 +173,13 @@
csize, maxcsize, ss, nscol0, nscol1, ns, nfsuper, newzeros, totzeros,
merge, snext, esize, maxesize, nrelax0, nrelax1, nrelax2, Asorted ;
int find_xsize ;
+#if (defined(CHOLMOD_HAS_CUDA) && defined(CHOLMOD_INT64))
const char* env_use_gpu;
const char* env_max_bytes;
size_t max_bytes;
const char* env_max_fraction;
double max_fraction ;
+#endif
RETURN_IF_NULL_COMMON (FALSE) ;
RETURN_IF_NULL (A, FALSE) ;
@@ -243,10 +245,11 @@
// real/complex/zomples only), and only when the GPU is requested and
// available.
+ #ifdef CHOLMOD_INT64
+
max_bytes = 0;
max_fraction = 0;
- #ifdef CHOLMOD_INT64
if ( Common->useGPU == EMPTY )
{
// useGPU not explicitly requested by the user, but not explicitly
@@ -552,9 +555,6 @@
double xns = (double) ns ;
double xtotsize = (xns * (xns+1) / 2) + xns * (lnz1 - nscol1) ;
double z = xtotzeros / xtotsize ;
-
- Int totsize ;
- totsize = (ns * (ns+1) / 2) + ns * (Snz [s+1] - nscol1) ;
PRINT2 (("oldzeros "ID" newzeros "ID" xtotsize %g z %g\n",
Zeros [s+1], newzeros, xtotsize, z)) ;
diff -ruN src/SuiteSparse/CHOLMOD/Supernodal/t_cholmod_super_numeric_worker.c src/SuiteSparse-patched/CHOLMOD/Supernodal/t_cholmod_super_numeric_worker.c
--- src/SuiteSparse/CHOLMOD/Supernodal/t_cholmod_super_numeric_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Supernodal/t_cholmod_super_numeric_worker.c 2024-08-30 22:55:25
@@ -152,15 +152,21 @@
#ifdef BLAS_TIMER
double tstart, blas_time ;
#endif
- Real *Lx, *Ax, *Fx, *Az, *Fz, *C ;
+ Real *Lx, *Ax, *Fx, *C ;
+#ifdef ZOMPLEX
+ Real *Az, *Fz ;
+#endif
Int *Super, *Head, *Ls, *Lpi, *Lpx, *Map, *SuperMap, *RelativeMap, *Next,
- *Lpos, *Fp, *Fi, *Fnz, *Ap, *Ai, *Anz, *Iwork, *Next_save, *Lpos_save,
- *Previous;
+ *Lpos, *Fp, *Fi, *Fnz, *Ap, *Ai, *Anz, *Iwork, *Next_save, *Lpos_save;
Int nsuper, n, s, k1, k2, nscol, psi, psx, psend, nsrow,
- pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2,
+ d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi2,
ndrow1, ndrow2, dancestor, sparent, dnext, nsrow2, ndrow3,
stype, Apacked, Fpacked, repeat_supernode, nscol2, ss,
- tail, nscol_new = 0;
+ nscol_new = 0;
+#if (defined (CHOLMOD_HAS_CUDA) && defined (DOUBLE))
+ Int *Previous ;
+ Int tail ;
+#endif
info = 0 ;
ASSERT (L->dtype == A->dtype) ;
@@ -215,7 +221,9 @@
Lpos = Iwork + 2*((size_t) n) + nsuper ; // size nsuper
Next_save = Iwork + 2*((size_t) n) + 2*((size_t) nsuper) ;// size nsuper
Lpos_save = Iwork + 2*((size_t) n) + 3*((size_t) nsuper) ;// size nsuper
+#if (defined (CHOLMOD_HAS_CUDA) && defined (DOUBLE))
Previous = Iwork + 2*((size_t) n) + 4*((size_t) nsuper) ;// size nsuper
+#endif
Map = Common->Flag ; // size n, use Flag as workspace for Map array
Head = Common->Head ; // size n+1, only Head [0..nsuper-1] used
@@ -273,7 +281,9 @@
Fp = NULL ;
Fi = NULL ;
Fx = NULL ;
+#ifdef ZOMPLEX
Fz = NULL ;
+#endif
Fnz = NULL ;
Fpacked = TRUE ;
}
@@ -284,7 +294,9 @@
Fp = F->p ;
Fi = F->i ;
Fx = F->x ;
+#ifdef ZOMPLEX
Fz = F->z ;
+#endif
Fnz = F->nz ;
Fpacked = F->packed ;
}
@@ -292,7 +304,9 @@
Ap = A->p ;
Ai = A->i ;
Ax = A->x ;
+#ifdef ZOMPLEX
Az = A->z ;
+#endif
Anz = A->nz ;
Apacked = A->packed ;
@@ -303,8 +317,10 @@
#endif
Int ii ;
+#ifdef _OPENMP
#pragma omp parallel for num_threads(nthreads) \
if ( n > 128 ) schedule (static)
+#endif
for (ii = 0 ; ii < n ; ii++)
{
Map [ii] = EMPTY ;
@@ -370,8 +386,10 @@
#endif
Int p ;
+#ifdef _OPENMP
#pragma omp parallel for num_threads(nthreads) \
schedule (static) if ( pend - psx > 1024 )
+#endif
for (p = psx ; p < pend ; p++)
{
L_CLEAR (Lx,p) ;
@@ -390,8 +408,10 @@
#endif
Int k ;
+#ifdef _OPENMP
#pragma omp parallel for num_threads(nthreads) \
if ( nsrow > 128 )
+#endif
for (k = 0 ; k < nsrow ; k++)
{
PRINT1 ((" "ID" map "ID"\n", Ls [psi+k], k)) ;
@@ -416,8 +436,6 @@
// copy matrix into supernode s (lower triangular part only)
//----------------------------------------------------------------------
- Int pk = psx ;
-
#ifdef _OPENMP
double work ;
if (stype != 0)
@@ -435,8 +453,10 @@
nthreads = cholmod_nthreads (work, Common) ;
#endif
+#ifdef _OPENMP
#pragma omp parallel for num_threads(nthreads) \
if ( k2-k1 > 64 )
+#endif
for (k = k1 ; k < k2 ; k++)
{
if (stype != 0)
@@ -894,8 +914,10 @@
#endif
Int i ;
+#ifdef _OPENMP
#pragma omp parallel for num_threads(nthreads) \
if ( ndrow2 > 64 )
+#endif
for (i = 0 ; i < ndrow2 ; i++)
{
RelativeMap [i] = Map [Ls [pdi1 + i]] ;
@@ -912,8 +934,10 @@
#endif
Int j ;
+#ifdef _OPENMP
#pragma omp parallel for num_threads(nthreads) \
if (ndrow1 > 64 )
+#endif
for (j = 0 ; j < ndrow1 ; j++) // cols k1:k2-1
{
ASSERT (RelativeMap [j] == Map [Ls [pdi1 + j]]) ;
diff -ruN src/SuiteSparse/CHOLMOD/Supernodal/t_cholmod_super_solve_worker.c src/SuiteSparse-patched/CHOLMOD/Supernodal/t_cholmod_super_solve_worker.c
--- src/SuiteSparse/CHOLMOD/Supernodal/t_cholmod_super_solve_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Supernodal/t_cholmod_super_solve_worker.c 2024-08-30 22:55:25
@@ -37,12 +37,11 @@
Real minus_one [2], one [2] ;
Int *Lpi, *Lpx, *Ls, *Super ;
Int nsuper, k1, k2, psi, psend, psx, nsrow, nscol, ii, s,
- nsrow2, n, ps2, j, i, d, nrhs ;
+ nsrow2, ps2, j, i, d, nrhs ;
nrhs = X->ncol ;
Ex = E->x ;
Xx = X->x ;
- n = L->n ;
d = X->d ;
nsuper = L->nsuper ;
@@ -326,12 +325,11 @@
Real minus_one [2], one [2] ;
Int *Lpi, *Lpx, *Ls, *Super ;
Int nsuper, k1, k2, psi, psend, psx, nsrow, nscol, ii, s,
- nsrow2, n, ps2, j, i, d, nrhs ;
+ nsrow2, ps2, j, i, d, nrhs ;
nrhs = X->ncol ;
Ex = E->x ;
Xx = X->x ;
- n = L->n ;
d = X->d ;
nsuper = L->nsuper ;
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_aat.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_aat.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_aat.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_aat.c 2024-08-30 22:55:25
@@ -106,7 +106,6 @@
bool ignore_diag = (mode < 0) ;
bool values = (mode > 0) && (A->xtype != CHOLMOD_PATTERN) ;
int axtype = (values) ? A->xtype : CHOLMOD_PATTERN ;
- bool conj = (mode >= 2) ;
Int nrow = A->nrow ;
Int ncol = A->ncol ;
@@ -121,12 +120,8 @@
// get the sizes of the entries of C and A
//--------------------------------------------------------------------------
- size_t ei = sizeof (Int) ;
- size_t e = (A->dtype == CHOLMOD_SINGLE) ? sizeof (float) : sizeof (double) ;
size_t ew = ((axtype == CHOLMOD_PATTERN) ? 0 :
((axtype == CHOLMOD_COMPLEX) ? 2 : 1)) ;
- size_t ex = e * ew ;
- size_t ez = e * ((axtype == CHOLMOD_ZOMPLEX) ? 1 : 0) ;
//--------------------------------------------------------------------------
// allocate workspace
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_aat_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_aat_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_aat_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_aat_worker.c 2024-08-30 22:55:25
@@ -35,20 +35,32 @@
Int *Ap = (Int *) A->p ;
Int *Anz = (Int *) A->nz ;
Int *Ai = (Int *) A->i ;
+#ifndef PATTERN
Real *Ax = (Real *) A->x ;
+#ifdef ZOMPLEX
Real *Az = (Real *) A->z ;
+#endif
+#endif
bool packed = A->packed ;
Int *Fp = (Int *) F->p ;
Int *Fi = (Int *) F->i ;
+#ifndef PATTERN
Real *Fx = (Real *) F->x ;
+#ifdef ZOMPLEX
Real *Fz = (Real *) F->z ;
+#endif
+#endif
ASSERT (F->packed) ;
Int *Cp = (Int *) C->p ;
Int *Ci = (Int *) C->i ;
+#ifndef PATTERN
Real *Cx = (Real *) C->x ;
+#ifdef ZOMPLEX
Real *Cz = (Real *) C->z ;
+#endif
+#endif
ASSERT (C->packed) ;
//--------------------------------------------------------------------------
@@ -93,8 +105,12 @@
//------------------------------------------------------------------
Int t = Fi [pf] ;
+#ifndef PATTERN
Real fx [2] = {0,0} ;
+#ifdef ZOMPLEX
Real fz [1] = {0} ;
+#endif
+#endif
ASSIGN (fx, fz, 0, Fx, Fz, pf) ;
//------------------------------------------------------------------
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_add.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_add.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_add.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_add.c 2024-08-30 22:55:25
@@ -118,12 +118,6 @@
// get the sizes of the entries of C, A, and B
//--------------------------------------------------------------------------
- size_t ei = sizeof (Int) ;
- size_t e = (dtype == CHOLMOD_SINGLE) ? sizeof (float) : sizeof (double) ;
- size_t ex = e * ((xtype == CHOLMOD_PATTERN) ? 0 :
- ((xtype == CHOLMOD_COMPLEX) ? 2 : 1)) ;
- size_t ez = e * ((xtype == CHOLMOD_ZOMPLEX) ? 1 : 0) ;
-
//--------------------------------------------------------------------------
// convert/sort A and/or B, if needed
//--------------------------------------------------------------------------
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_band_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_band_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_band_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_band_worker.c 2024-08-30 22:55:25
@@ -30,14 +30,22 @@
Int *Ap = (Int *) A->p ;
Int *Anz = (Int *) A->nz ;
Int *Ai = (Int *) A->i ;
+#ifndef PATTERN
Real *Ax = (Real *) A->x ;
+#ifdef ZOMPLEX
Real *Az = (Real *) A->z ;
+#endif
+#endif
bool packed = A->packed ;
Int *Cp = (Int *) C->p ;
Int *Ci = (Int *) C->i ;
+#ifndef PATTERN
Real *Cx = (Real *) C->x ;
+#ifdef ZOMPLEX
Real *Cz = (Real *) C->z ;
+#endif
+#endif
// columns outside of j1:j2 have no entries in diagonals k1:k2
Int j1 = MAX (k1, 0) ;
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_change_factor.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_change_factor.c 2024-08-30 22:55:25
@@ -698,8 +698,6 @@
bool make_ldl = (!to_ll && L->is_ll) ;
Int n = L->n ;
- Int *Lp = (Int *) L->p ;
- Int *Li = (Int *) L->i ;
Int *Lnz = (Int *) L->nz ;
bool grow = false ;
@@ -900,11 +898,8 @@
// get inputs
//--------------------------------------------------------------------------
- Int n = L->n ;
Int nsuper = L->nsuper ;
Int *Lpi = (Int *) L->pi ;
- Int *Lpx = (Int *) L->px ;
- Int *Ls = (Int *) L->s ;
Int *Super = (Int *) L->super ;
size_t ei = sizeof (Int) ;
@@ -1088,7 +1083,6 @@
// get the sizes of the entries
//--------------------------------------------------------------------------
- size_t ei = sizeof (Int) ;
size_t e = (L->dtype == CHOLMOD_SINGLE) ? sizeof (float) : sizeof (double) ;
size_t ex = e * ((to_xtype == CHOLMOD_COMPLEX) ? 2 : 1) ;
size_t xs = L->xsize ;
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor_1_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_change_factor_1_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor_1_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_change_factor_1_worker.c 2024-08-30 22:55:25
@@ -36,7 +36,9 @@
Int *Lp = (Int *) L->p ;
Int *Li = (Int *) L->i ;
Real *Lx = (Real *) L->x ;
+#ifdef ZOMPLEX
Real *Lz = (Real *) L->z ;
+#endif
Int n = L->n ;
//--------------------------------------------------------------------------
@@ -44,7 +46,9 @@
//--------------------------------------------------------------------------
Real onex [2] = {1,0} ;
+#ifdef ZOMPLEX
Real onez [1] = {0} ;
+#endif
for (Int j = 0 ; j < n ; j++)
{
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor_2_template.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_change_factor_2_template.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor_2_template.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_change_factor_2_template.c 2024-08-30 22:55:25
@@ -34,7 +34,9 @@
//------------------------------------------------------------------------------
{
+#ifndef IN_PLACE
Int pnew = 0 ;
+#endif
if (make_ll)
{
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor_2_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_change_factor_2_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor_2_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_change_factor_2_worker.c 2024-08-30 22:55:25
@@ -50,7 +50,9 @@
Int *Lp = (Int *) L->p ;
Int *Li = (Int *) L->i ;
Real *Lx = (Real *) L->x ;
+#ifdef ZOMPLEX
Real *Lz = (Real *) L->z ;
+#endif
Int *Lnz = (Int *) L->nz ;
//--------------------------------------------------------------------------
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor_3_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_change_factor_3_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor_3_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_change_factor_3_worker.c 2024-08-30 22:55:25
@@ -100,7 +100,6 @@
Int *Lp = (Int *) L->p ; // simplicial col pointers
Int *Li = (Int *) L->i ; // simplicial row indices
Int *Lnz = (Int *) L->nz ; // simplicial column counts
- Int lnz = L->nzmax ; // size of Li, Lp, and Lx
//----------------------------------------------------------------------
// convert supernodal LL' to simplicial LL' or LDL' (packed/unpacked)
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_xdtype.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_change_xdtype.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_xdtype.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_change_xdtype.c 2024-08-30 22:55:25
@@ -214,7 +214,7 @@
int output_dtype = to_xdtype & 4 ; // double or single
if (output_xtype <= CHOLMOD_PATTERN ||
- L->is_super && output_xtype == CHOLMOD_ZOMPLEX)
+ (L->is_super && output_xtype == CHOLMOD_ZOMPLEX))
{
// output_xtype not supported
ERROR (CHOLMOD_INVALID, "invalid xtype") ;
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_dense2_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_copy_dense2_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_dense2_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_copy_dense2_worker.c 2024-08-30 22:55:25
@@ -36,9 +36,13 @@
//--------------------------------------------------------------------------
Real *Xx = (Real *) X->x ;
+#ifdef ZOMPLEX
Real *Xz = (Real *) X->z ;
+#endif
Real *Yx = (Real *) Y->x ;
+#ifdef ZOMPLEX
Real *Yz = (Real *) Y->z ;
+#endif
size_t nrow = X->nrow ;
size_t ncol = X->ncol ;
size_t xd = X->d ;
@@ -50,9 +54,13 @@
size_t e = (X->dtype == CHOLMOD_SINGLE) ? sizeof (float) : sizeof (double) ;
size_t fx = ((X->xtype == CHOLMOD_COMPLEX) ? 2 : 1) ;
+#ifdef ZOMPLEX
size_t fz = ((X->xtype == CHOLMOD_ZOMPLEX) ? 1 : 0) ;
+#endif
size_t e_fx_nrow = e * fx * nrow ;
+#ifdef ZOMPLEX
size_t e_fz_nrow = e * fz * nrow ;
+#endif
//--------------------------------------------------------------------------
// copy X = Y
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_factor.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_copy_factor.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_factor.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_copy_factor.c 2024-08-30 22:55:25
@@ -69,7 +69,6 @@
size_t e = (L->dtype == CHOLMOD_SINGLE) ? sizeof (float) : sizeof (double) ;
size_t ex = e * ((L->xtype == CHOLMOD_PATTERN) ? 0 :
((L->xtype == CHOLMOD_COMPLEX) ? 2 : 1)) ;
- size_t ez = e * ((L->xtype == CHOLMOD_ZOMPLEX) ? 1 : 0) ;
//--------------------------------------------------------------------------
// allocate the new factor H, H->Perm, and H->ColCount
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_factor_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_copy_factor_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_factor_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_copy_factor_worker.c 2024-08-30 22:55:25
@@ -29,11 +29,15 @@
Int *Li = (Int *) L->i ;
Int *Lnz = (Int *) L->nz ;
Real *Lx = (Real *) L->x ;
+#ifdef ZOMPLEX
Real *Lz = (Real *) L->z ;
+#endif
Int *Hi = (Int *) H->i ;
Real *Hx = (Real *) H->x ;
+#ifdef ZOMPLEX
Real *Hz = (Real *) H->z ;
+#endif
//--------------------------------------------------------------------------
// copy each column
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_sparse_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_copy_sparse_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_sparse_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_copy_sparse_worker.c 2024-08-30 22:55:25
@@ -31,13 +31,21 @@
Int *Ap = (Int *) A->p ;
Int *Anz = (Int *) A->nz ;
Int *Ai = (Int *) A->i ;
+#ifndef PATTERN
Real *Ax = (Real *) A->x ;
+#ifdef ZOMPLEX
Real *Az = (Real *) A->z ;
+#endif
+#endif
size_t ncol = A->ncol ;
Int *Ci = (Int *) C->i ;
+#ifndef PATTERN
Real *Cx = (Real *) C->x ;
+#ifdef ZOMPLEX
Real *Cz = (Real *) C->z ;
+#endif
+#endif
//--------------------------------------------------------------------------
// copy the contents from A to C
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_copy_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_copy_worker.c 2024-08-30 22:55:25
@@ -45,14 +45,21 @@
Int *Ap = (Int *) A->p ;
Int *Anz = (Int *) A->nz ;
Int *Ai = (Int *) A->i ;
+#ifndef PATTERN
Real *Ax = (Real *) A->x ;
+#ifdef ZOMPLEX
Real *Az = (Real *) A->z ;
+#endif
+#endif
bool packed = A->packed ;
- Int *Cp = (Int *) C->p ;
Int *Ci = (Int *) C->i ;
+#ifndef PATTERN
Real *Cx = (Real *) C->x ;
+#ifdef ZOMPLEX
Real *Cz = (Real *) C->z ;
+#endif
+#endif
bool keep_diag = !ignore_diag ;
//--------------------------------------------------------------------------
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_dense_nnz_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_dense_nnz_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_dense_nnz_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_dense_nnz_worker.c 2024-08-30 22:55:25
@@ -21,7 +21,9 @@
//--------------------------------------------------------------------------
Real *Xx = (Real *) X->x ;
+#ifdef ZOMPLEX
Real *Xz = (Real *) X->z ;
+#endif
Int nrow = (Int) X->nrow ;
Int ncol = (Int) X->ncol ;
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_dense_to_sparse_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_dense_to_sparse_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_dense_to_sparse_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_dense_to_sparse_worker.c 2024-08-30 22:55:25
@@ -34,7 +34,9 @@
//--------------------------------------------------------------------------
Real *Xx = (Real *) X->x ;
+#ifdef ZOMPLEX
Real *Xz = (Real *) X->z ;
+#endif
Int nrow = X->nrow ;
Int ncol = X->ncol ;
Int d = X->d ;
@@ -42,7 +44,9 @@
Int *Cp = (Int *) C->p ;
Int *Ci = (Int *) C->i ;
Real *Cx = (Real *) C->x ;
+#ifdef ZOMPLEX
Real *Cz = (Real *) C->z ;
+#endif
bool pattern = (C->xtype == CHOLMOD_PATTERN) ;
//--------------------------------------------------------------------------
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_eye_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_eye_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_eye_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_eye_worker.c 2024-08-30 22:55:25
@@ -21,14 +21,18 @@
//--------------------------------------------------------------------------
Real *Xx = (Real *) X->x ;
+#ifdef ZOMPLEX
Real *Xz = (Real *) X->z ;
+#endif
Int nrow = (Int) X->nrow ;
Int ncol = (Int) X->ncol ;
Int n = MIN (nrow, ncol) ;
Real onex [2] = {1,0} ;
+#ifdef ZOMPLEX
Real onez [1] = {0} ;
+#endif
for (Int k = 0 ; k < n ; k++)
{
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_ones_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_ones_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_ones_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_ones_worker.c 2024-08-30 22:55:25
@@ -21,11 +21,15 @@
//--------------------------------------------------------------------------
Real *Xx = (Real *) X->x ;
+#ifdef ZOMPLEX
Real *Xz = (Real *) X->z ;
+#endif
size_t nzmax = X->nzmax ;
Real onex [2] = {1,0} ;
+#ifdef ZOMPLEX
Real onez [1] = {0} ;
+#endif
for (Int k = 0 ; k < nzmax ; k++)
{
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_pack_factor_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_pack_factor_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_pack_factor_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_pack_factor_worker.c 2024-08-30 22:55:25
@@ -29,7 +29,9 @@
Int *Lp = (Int *) L->p ;
Int *Li = (Int *) L->i ;
Real *Lx = (Real *) L->x ;
+#ifdef ZOMPLEX
Real *Lz = (Real *) L->z ;
+#endif
Int *Lnz = (Int *) L->nz ;
Int *Lnext = (Int *) L->next ;
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_realloc.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_realloc.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_realloc.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_realloc.c 2024-08-30 22:55:25
@@ -34,7 +34,9 @@
int ok ;
bool newly_allocated = (p == NULL) ;
+#ifndef NDEBUG
void *pold = p ;
+#endif
size_t nold = (*n) ;
p = SuiteSparse_realloc (nnew, *n, size, p, &ok) ;
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_reallocate_column.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_reallocate_column.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_reallocate_column.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_reallocate_column.c 2024-08-30 22:55:25
@@ -84,7 +84,6 @@
need = MAX (need, 1) ;
double slack = MAX (Common->grow1, 1.0) * ((double) need) + Common->grow2 ;
slack = MIN (slack, (double) (n-j)) ;
- size_t nslack = (size_t) floor (slack) ;
need = MAX (need, slack) ;
need = MAX (need, 1) ;
need = MIN (need, n-j) ;
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_reallocate_column_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_reallocate_column_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_reallocate_column_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_reallocate_column_worker.c 2024-08-30 22:55:25
@@ -26,7 +26,9 @@
Int *Lnz = (Int *) L->nz ;
Int *Li = (Int *) L->i ;
Real *Lx = (Real *) L->x ;
+#ifdef ZOMPLEX
Real *Lz = (Real *) L->z ;
+#endif
Int len = Lnz [j] ;
//--------------------------------------------------------------------------
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_sort_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_sort_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_sort_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_sort_worker.c 2024-08-30 22:55:25
@@ -185,8 +185,12 @@
Int *Ap = (Int *) A->p ;
Int *Ai = (Int *) A->i ;
Int *Anz = (Int *) A->nz ;
+#ifndef PATTERN
Real *Ax = (Real *) A->x ;
+#ifdef ZOMPLEX
Real *Az = (Real *) A->z ;
+#endif
+#endif
Int ncol = A->ncol ;
bool packed = A->packed ;
uint64_t seed = 42 ;
@@ -207,7 +211,6 @@
if (i < ilast)
{
// sort Ai, Ax, Ax [pa:pend-1] according to row index Ai
- Int jnz = pend - pa ;
CM_QSRT (Ai, Ax, Az, pa, pend - pa, &seed) ;
break ;
}
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_sparse_to_dense_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_sparse_to_dense_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_sparse_to_dense_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_sparse_to_dense_worker.c 2024-08-30 22:55:25
@@ -30,13 +30,19 @@
//--------------------------------------------------------------------------
Real *Xx = (Real *) X->x ;
+#ifdef ZOMPLEX
Real *Xz = (Real *) X->z ;
+#endif
Int *Ap = (Int *) A->p ;
Int *Ai = (Int *) A->i ;
Int *Anz = (Int *) A->nz ;
+#ifndef PATTERN
Real *Ax = (Real *) A->x ;
+#ifdef ZOMPLEX
Real *Az = (Real *) A->z ;
+#endif
+#endif
Int nrow = (Int) A->nrow ;
Int ncol = (Int) A->ncol ;
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_sparse_to_triplet_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_sparse_to_triplet_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_sparse_to_triplet_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_sparse_to_triplet_worker.c 2024-08-30 22:55:25
@@ -21,19 +21,26 @@
// get inputs
//--------------------------------------------------------------------------
- Int nrow = A->nrow ;
Int ncol = A->ncol ;
bool packed = (bool) A->packed ;
Int *Ap = (Int *) A->p ;
Int *Ai = (Int *) A->i ;
+#ifndef PATTERN
Real *Ax = (Real *) A->x ;
+#ifdef ZOMPLEX
Real *Az = (Real *) A->z ;
+#endif
+#endif
Int *Anz = (Int *) A->nz ;
Int *Ti = (Int *) T->i ;
Int *Tj = (Int *) T->j ;
+#ifndef PATTERN
Real *Tx = (Real *) T->x ;
+#ifdef ZOMPLEX
Real *Tz = (Real *) T->z ;
+#endif
+#endif
Int k = 0 ;
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_speye_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_speye_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_speye_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_speye_worker.c 2024-08-30 22:55:25
@@ -22,15 +22,23 @@
Int *Ap = (Int *) A->p ;
Int *Ai = (Int *) A->i ;
+#ifndef PATTERN
Real *Ax = (Real *) A->x ;
+#ifdef ZOMPLEX
Real *Az = (Real *) A->z ;
+#endif
+#endif
Int ncol = (Int) A->ncol ;
Int nrow = (Int) A->nrow ;
Int n = MIN (nrow, ncol) ;
+#ifndef PATTERN
Real onex [2] = {1,0} ;
+#ifdef ZOMPLEX
Real onez [1] = {0} ;
+#endif
+#endif
for (Int k = 0 ; k < n ; k++)
{
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_sym_permuted.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_transpose_sym_permuted.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_sym_permuted.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_transpose_sym_permuted.c 2024-08-30 22:55:25
@@ -44,7 +44,10 @@
#endif
{
// C(jnew,inew) = conj (A(iold,jold))
- Int pc = Wi [inew]++ ;
+#ifdef NUMERIC
+ Int pc =
+#endif
+ Wi [inew]++ ;
#ifdef NUMERIC
ASSIGN_CONJ_OR_NCONJ (Cx, Cz, pc, Ax, Az, pa) ;
Ci [pc] = jnew ;
@@ -53,7 +56,10 @@
else
{
// C(inew,jnew) = A(iold,jold)
- Int pc = Wi [jnew]++ ;
+#ifdef NUMERIC
+ Int pc =
+#endif
+ Wi [jnew]++ ;
#ifdef NUMERIC
ASSIGN (Cx, Cz, pc, Ax, Az, pa) ;
Ci [pc] = inew ;
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_sym_unpermuted.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_transpose_sym_unpermuted.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_sym_unpermuted.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_transpose_sym_unpermuted.c 2024-08-30 22:55:25
@@ -40,7 +40,10 @@
if (i > j) continue ;
#endif
// C(j,i) = conj (A(i,j))
- Int pc = Wi [i]++ ;
+#ifdef NUMERIC
+ Int pc =
+#endif
+ Wi [i]++ ;
#ifdef NUMERIC
ASSIGN_CONJ_OR_NCONJ (Cx, Cz, pc, Ax, Az, pa) ;
Ci [pc] = j ;
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_sym_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_transpose_sym_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_sym_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_transpose_sym_worker.c 2024-08-30 22:55:25
@@ -28,13 +28,20 @@
Int *Ap = (Int *) A->p ;
Int *Ai = (Int *) A->i ;
Int *Anz = (Int *) A->nz ;
+#ifndef PATTERN
Real *Ax = (Real *) A->x ;
+#ifdef ZOMPLEX
Real *Az = (Real *) A->z ;
+#endif
+#endif
- Int *Cp = (Int *) C->p ;
Int *Ci = (Int *) C->i ;
+#ifndef PATTERN
Real *Cx = (Real *) C->x ;
+#ifdef ZOMPLEX
Real *Cz = (Real *) C->z ;
+#endif
+#endif
//--------------------------------------------------------------------------
// compute pattern and values of C
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_unsym_template.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_transpose_unsym_template.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_unsym_template.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_transpose_unsym_template.c 2024-08-30 22:55:25
@@ -59,7 +59,10 @@
for ( ; p < pend ; p++)
{
// get A(i,j) and count it or get its place in C
- Int pc = Wi [Ai [p]]++ ;
+#ifdef NUMERIC
+ Int pc =
+#endif
+ Wi [Ai [p]]++ ;
#ifdef NUMERIC
// C(j,i) = conj (A(i,j))
ASSIGN_CONJ_OR_NCONJ (Cx, Cz, pc, Ax, Az, p) ;
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_unsym_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_transpose_unsym_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_unsym_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_transpose_unsym_worker.c 2024-08-30 22:55:25
@@ -27,14 +27,21 @@
Int *Ap = (Int *) A->p ;
Int *Ai = (Int *) A->i ;
Int *Anz = (Int *) A->nz ;
+#ifndef PATTERN
Real *Ax = (Real *) A->x ;
+#ifdef ZOMPLEX
Real *Az = (Real *) A->z ;
+#endif
+#endif
Int ncol = A->ncol ;
- Int *Cp = (Int *) C->p ;
Int *Ci = (Int *) C->i ;
+#ifndef PATTERN
Real *Cx = (Real *) C->x ;
+#ifdef ZOMPLEX
Real *Cz = (Real *) C->z ;
+#endif
+#endif
//--------------------------------------------------------------------------
// compute the pattern and values of C
diff -ruN src/SuiteSparse/CHOLMOD/Utility/t_cholmod_triplet_to_sparse_worker.c src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_triplet_to_sparse_worker.c
--- src/SuiteSparse/CHOLMOD/Utility/t_cholmod_triplet_to_sparse_worker.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CHOLMOD/Utility/t_cholmod_triplet_to_sparse_worker.c 2024-08-30 22:55:25
@@ -25,13 +25,21 @@
Int *Rp = (Int *) R->p ;
Int *Ri = (Int *) R->i ;
Int *Rnz = (Int *) R->nz ;
+#ifndef PATTERN
Real *Rx = (Real *) R->x ;
+#ifdef ZOMPLEX
Real *Rz = (Real *) R->z ;
+#endif
+#endif
Int *Ti = (Int *) T->i ;
Int *Tj = (Int *) T->j ;
+#ifndef PATTERN
Real *Tx = (Real *) T->x ;
+#ifdef ZOMPLEX
Real *Tz = (Real *) T->z ;
+#endif
+#endif
size_t nrow = T->nrow ;
size_t ncol = T->ncol ;
Int nz = T->nnz ;
diff -ruN src/SuiteSparse/COLAMD/Makefile src/SuiteSparse-patched/COLAMD/Makefile
--- src/SuiteSparse/COLAMD/Makefile 1969-12-31 19:00:00
+++ src/SuiteSparse-patched/COLAMD/Makefile 2024-08-30 22:55:25
@@ -0,0 +1,18 @@
+sources = Source/colamd.c Source/colamd_l.c Source/colamd_version.c
+objects = $(sources:.c=.o)
+archive = COLAMD.a
+
+PKG_CPPFLAGS = -I./Include -I../SuiteSparse_config
+
+all : $(archive)
+
+$(archive) : $(objects)
+ rm -f $@
+ $(AR) -cr $@ $(objects)
+ $(RANLIB) $@
+
+.c.o :
+ $(CC) $(PKG_CPPFLAGS) $(CPPFLAGS) $(CFLAGS) -c $< -o $*.o
+
+clean :
+ @rm -f $(objects) $(archive)
diff -ruN src/SuiteSparse/CXSparse/Makefile src/SuiteSparse-patched/CXSparse/Makefile
--- src/SuiteSparse/CXSparse/Makefile 1969-12-31 19:00:00
+++ src/SuiteSparse-patched/CXSparse/Makefile 2024-08-30 22:55:25
@@ -0,0 +1,71 @@
+sources = \
+ Source/cs_add.c Source/cs_dl_add.c Source/cs_ci_add.c Source/cs_cl_add.c \
+ Source/cs_amd.c Source/cs_dl_amd.c Source/cs_ci_amd.c Source/cs_cl_amd.c \
+ Source/cs_chol.c Source/cs_dl_chol.c Source/cs_ci_chol.c Source/cs_cl_chol.c \
+ Source/cs_cholsol.c Source/cs_dl_cholsol.c Source/cs_ci_cholsol.c Source/cs_cl_cholsol.c \
+ Source/cs_compress.c Source/cs_dl_compress.c Source/cs_ci_compress.c Source/cs_cl_compress.c \
+ Source/cs_convert.c \
+ Source/cs_counts.c Source/cs_dl_counts.c Source/cs_ci_counts.c Source/cs_cl_counts.c \
+ Source/cs_cumsum.c Source/cs_dl_cumsum.c Source/cs_ci_cumsum.c Source/cs_cl_cumsum.c \
+ Source/cs_dfs.c Source/cs_dl_dfs.c Source/cs_ci_dfs.c Source/cs_cl_dfs.c \
+ Source/cs_dmperm.c Source/cs_dl_dmperm.c Source/cs_ci_dmperm.c Source/cs_cl_dmperm.c \
+ Source/cs_droptol.c Source/cs_dl_droptol.c Source/cs_ci_droptol.c Source/cs_cl_droptol.c \
+ Source/cs_dropzeros.c Source/cs_dl_dropzeros.c Source/cs_ci_dropzeros.c Source/cs_cl_dropzeros.c \
+ Source/cs_dupl.c Source/cs_dl_dupl.c Source/cs_ci_dupl.c Source/cs_cl_dupl.c \
+ Source/cs_entry.c Source/cs_dl_entry.c Source/cs_ci_entry.c Source/cs_cl_entry.c \
+ Source/cs_ereach.c Source/cs_dl_ereach.c Source/cs_ci_ereach.c Source/cs_cl_ereach.c \
+ Source/cs_etree.c Source/cs_dl_etree.c Source/cs_ci_etree.c Source/cs_cl_etree.c \
+ Source/cs_fkeep.c Source/cs_dl_fkeep.c Source/cs_ci_fkeep.c Source/cs_cl_fkeep.c \
+ Source/cs_gaxpy.c Source/cs_dl_gaxpy.c Source/cs_ci_gaxpy.c Source/cs_cl_gaxpy.c \
+ Source/cs_happly.c Source/cs_dl_happly.c Source/cs_ci_happly.c Source/cs_cl_happly.c \
+ Source/cs_house.c Source/cs_dl_house.c Source/cs_ci_house.c Source/cs_cl_house.c \
+ Source/cs_ipvec.c Source/cs_dl_ipvec.c Source/cs_ci_ipvec.c Source/cs_cl_ipvec.c \
+ Source/cs_leaf.c Source/cs_dl_leaf.c Source/cs_ci_leaf.c Source/cs_cl_leaf.c \
+ Source/cs_load.c Source/cs_dl_load.c Source/cs_ci_load.c Source/cs_cl_load.c \
+ Source/cs_lsolve.c Source/cs_dl_lsolve.c Source/cs_ci_lsolve.c Source/cs_cl_lsolve.c \
+ Source/cs_ltsolve.c Source/cs_dl_ltsolve.c Source/cs_ci_ltsolve.c Source/cs_cl_ltsolve.c \
+ Source/cs_lu.c Source/cs_dl_lu.c Source/cs_ci_lu.c Source/cs_cl_lu.c \
+ Source/cs_lusol.c Source/cs_dl_lusol.c Source/cs_ci_lusol.c Source/cs_cl_lusol.c \
+ Source/cs_malloc.c Source/cs_dl_malloc.c Source/cs_ci_malloc.c Source/cs_cl_malloc.c \
+ Source/cs_maxtrans.c Source/cs_dl_maxtrans.c Source/cs_ci_maxtrans.c Source/cs_cl_maxtrans.c \
+ Source/cs_multiply.c Source/cs_dl_multiply.c Source/cs_ci_multiply.c Source/cs_cl_multiply.c \
+ Source/cs_norm.c Source/cs_dl_norm.c Source/cs_ci_norm.c Source/cs_cl_norm.c \
+ Source/cs_permute.c Source/cs_dl_permute.c Source/cs_ci_permute.c Source/cs_cl_permute.c \
+ Source/cs_pinv.c Source/cs_dl_pinv.c Source/cs_ci_pinv.c Source/cs_cl_pinv.c \
+ Source/cs_post.c Source/cs_dl_post.c Source/cs_ci_post.c Source/cs_cl_post.c \
+ Source/cs_print.c Source/cs_dl_print.c Source/cs_ci_print.c Source/cs_cl_print.c \
+ Source/cs_pvec.c Source/cs_dl_pvec.c Source/cs_ci_pvec.c Source/cs_cl_pvec.c \
+ Source/cs_qr.c Source/cs_dl_qr.c Source/cs_ci_qr.c Source/cs_cl_qr.c \
+ Source/cs_qrsol.c Source/cs_dl_qrsol.c Source/cs_ci_qrsol.c Source/cs_cl_qrsol.c \
+ Source/cs_randperm.c Source/cs_dl_randperm.c Source/cs_ci_randperm.c Source/cs_cl_randperm.c \
+ Source/cs_reach.c Source/cs_dl_reach.c Source/cs_ci_reach.c Source/cs_cl_reach.c \
+ Source/cs_scatter.c Source/cs_dl_scatter.c Source/cs_ci_scatter.c Source/cs_cl_scatter.c \
+ Source/cs_scc.c Source/cs_dl_scc.c Source/cs_ci_scc.c Source/cs_cl_scc.c \
+ Source/cs_schol.c Source/cs_dl_schol.c Source/cs_ci_schol.c Source/cs_cl_schol.c \
+ Source/cs_spsolve.c Source/cs_dl_spsolve.c Source/cs_ci_spsolve.c Source/cs_cl_spsolve.c \
+ Source/cs_sqr.c Source/cs_dl_sqr.c Source/cs_ci_sqr.c Source/cs_cl_sqr.c \
+ Source/cs_symperm.c Source/cs_dl_symperm.c Source/cs_ci_symperm.c Source/cs_cl_symperm.c \
+ Source/cs_tdfs.c Source/cs_dl_tdfs.c Source/cs_ci_tdfs.c Source/cs_cl_tdfs.c \
+ Source/cs_transpose.c Source/cs_dl_transpose.c Source/cs_ci_transpose.c Source/cs_cl_transpose.c \
+ Source/cs_updown.c Source/cs_dl_updown.c Source/cs_ci_updown.c Source/cs_cl_updown.c \
+ Source/cs_usolve.c Source/cs_dl_usolve.c Source/cs_ci_usolve.c Source/cs_cl_usolve.c \
+ Source/cs_util.c Source/cs_dl_util.c Source/cs_ci_util.c Source/cs_cl_util.c \
+ Source/cs_utsolve.c Source/cs_dl_utsolve.c Source/cs_ci_utsolve.c Source/cs_cl_utsolve.c \
+ Source/cxsparse_version.c
+objects = $(sources:.c=.o)
+archive = CXSparse.a
+
+PKG_CPPFLAGS = -I./Include -I../SuiteSparse_config
+
+all : $(archive)
+
+$(archive) : $(objects)
+ rm -f $@
+ $(AR) -cr $@ $(objects)
+ $(RANLIB) $@
+
+.c.o :
+ $(CC) $(PKG_CPPFLAGS) $(CPPFLAGS) $(CFLAGS) -c $< -o $*.o
+
+clean :
+ @rm -f $(objects) $(archive)
diff -ruN src/SuiteSparse/CXSparse/Source/cs_multiply.c src/SuiteSparse-patched/CXSparse/Source/cs_multiply.c
--- src/SuiteSparse/CXSparse/Source/cs_multiply.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CXSparse/Source/cs_multiply.c 2024-08-30 22:55:25
@@ -20,7 +20,8 @@
Cp = C->p ;
for (j = 0 ; j < n ; j++)
{
- if (nz + m > C->nzmax && !cs_sprealloc (C, 2*(C->nzmax)+m))
+ if (C->nzmax > (CS_INT_MAX - m) / 2 || /* 2*(C->nzmax)+m overflows */
+ (nz + m > C->nzmax && !cs_sprealloc (C, 2*(C->nzmax)+m)))
{
return (cs_done (C, w, x, 0)) ; /* out of memory */
}
diff -ruN src/SuiteSparse/CXSparse/Source/cs_print.c src/SuiteSparse-patched/CXSparse/Source/cs_print.c
--- src/SuiteSparse/CXSparse/Source/cs_print.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CXSparse/Source/cs_print.c 2024-08-30 22:55:25
@@ -2,52 +2,54 @@
// CXSparse, Copyright (c) 2006-2022, Timothy A. Davis. All Rights Reserved.
// SPDX-License-Identifier: LGPL-2.1+
#include "cs.h"
+#include <R_ext/Print.h>
+
/* print a sparse matrix; use %g for integers to avoid differences with CS_INT */
CS_INT cs_print (const cs *A, CS_INT brief)
{
CS_INT p, j, m, n, nzmax, nz, *Ap, *Ai ;
CS_ENTRY *Ax ;
- if (!A) { printf ("(null)\n") ; return (0) ; }
+ if (!A) { Rprintf ("(null)\n") ; return (0) ; }
m = A->m ; n = A->n ; Ap = A->p ; Ai = A->i ; Ax = A->x ;
nzmax = A->nzmax ; nz = A->nz ;
- printf ("CXSparse Version %d.%d.%d, %s. %s\n", CS_VER, CS_SUBVER,
+ Rprintf ("CXSparse Version %d.%d.%d, %s. %s\n", CS_VER, CS_SUBVER,
CS_SUBSUB, CS_DATE, CS_COPYRIGHT) ;
if (nz < 0)
{
- printf ("%g-by-%g, nzmax: %g nnz: %g, 1-norm: %g\n", (double) m,
+ Rprintf ("%g-by-%g, nzmax: %g nnz: %g, 1-norm: %g\n", (double) m,
(double) n, (double) nzmax, (double) (Ap [n]), cs_norm (A)) ;
for (j = 0 ; j < n ; j++)
{
- printf (" col %g : locations %g to %g\n", (double) j,
+ Rprintf (" col %g : locations %g to %g\n", (double) j,
(double) (Ap [j]), (double) (Ap [j+1]-1)) ;
for (p = Ap [j] ; p < Ap [j+1] ; p++)
{
- printf (" %g : ", (double) (Ai [p])) ;
+ Rprintf (" %g : ", (double) (Ai [p])) ;
#ifdef CS_COMPLEX
- printf ("(%g, %g)\n",
+ Rprintf ("(%g, %g)\n",
Ax ? CS_REAL (Ax [p]) : 1, Ax ? CS_IMAG (Ax [p]) : 0) ;
#else
- printf ("%g\n", Ax ? Ax [p] : 1) ;
+ Rprintf ("%g\n", Ax ? Ax [p] : 1) ;
#endif
- if (brief && p > 20) { printf (" ...\n") ; return (1) ; }
+ if (brief && p > 20) { Rprintf (" ...\n") ; return (1) ; }
}
}
}
else
{
- printf ("triplet: %g-by-%g, nzmax: %g nnz: %g\n", (double) m,
+ Rprintf ("triplet: %g-by-%g, nzmax: %g nnz: %g\n", (double) m,
(double) n, (double) nzmax, (double) nz) ;
for (p = 0 ; p < nz ; p++)
{
- printf (" %g %g : ", (double) (Ai [p]), (double) (Ap [p])) ;
+ Rprintf (" %g %g : ", (double) (Ai [p]), (double) (Ap [p])) ;
#ifdef CS_COMPLEX
- printf ("(%g, %g)\n",
+ Rprintf ("(%g, %g)\n",
Ax ? CS_REAL (Ax [p]) : 1, Ax ? CS_IMAG (Ax [p]) : 0) ;
#else
- printf ("%g\n", Ax ? Ax [p] : 1) ;
+ Rprintf ("%g\n", Ax ? Ax [p] : 1) ;
#endif
- if (brief && p > 20) { printf (" ...\n") ; return (1) ; }
+ if (brief && p > 20) { Rprintf (" ...\n") ; return (1) ; }
}
}
return (1) ;
diff -ruN src/SuiteSparse/CXSparse/Source/cs_randperm.c src/SuiteSparse-patched/CXSparse/Source/cs_randperm.c
--- src/SuiteSparse/CXSparse/Source/cs_randperm.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/CXSparse/Source/cs_randperm.c 2024-08-30 22:55:25
@@ -2,6 +2,8 @@
// CXSparse, Copyright (c) 2006-2022, Timothy A. Davis. All Rights Reserved.
// SPDX-License-Identifier: LGPL-2.1+
#include "cs.h"
+#include <R_ext/Random.h>
+
/* return a random permutation vector, the identity perm, or p = n-1:-1:0.
* seed = -1 means p = n-1:-1:0. seed = 0 means p = identity. otherwise
* p = random permutation. */
@@ -13,13 +15,14 @@
if (!p) return (NULL) ; /* out of memory */
for (k = 0 ; k < n ; k++) p [k] = n-k-1 ;
if (seed == -1) return (p) ; /* return reverse permutation */
- srand (seed) ; /* get new random number seed */
+ GetRNGstate();
for (k = 0 ; k < n ; k++)
{
- j = k + (rand ( ) % (n-k)) ; /* j = rand integer in range k to n-1 */
+ j = k + (CS_INT) (unif_rand() * (RAND_MAX + 1.0)) % (n-k) ; /* j = rand integer in range k to n-1 */
t = p [j] ; /* swap p[k] and p[j] */
p [j] = p [k] ;
p [k] = t ;
}
+ PutRNGstate();
return (p) ;
}
diff -ruN src/SuiteSparse/SuiteSparse_config/Makefile src/SuiteSparse-patched/SuiteSparse_config/Makefile
--- src/SuiteSparse/SuiteSparse_config/Makefile 1969-12-31 19:00:00
+++ src/SuiteSparse-patched/SuiteSparse_config/Makefile 2024-08-30 22:55:25
@@ -0,0 +1,16 @@
+sources = SuiteSparse_config.c
+objects = $(sources:.c=.o)
+archive = SuiteSparse_config.a
+
+all : $(archive)
+
+$(archive) : $(objects)
+ rm -f $@
+ $(AR) -cr $@ $(objects)
+ $(RANLIB) $@
+
+.c.o :
+ $(CC) $(CPPFLAGS) $(CFLAGS) -c $< -o $*.o
+
+clean :
+ @rm -f $(objects) $(archive)
diff -ruN src/SuiteSparse/SuiteSparse_config/SuiteSparse_config.c src/SuiteSparse-patched/SuiteSparse_config/SuiteSparse_config.c
--- src/SuiteSparse/SuiteSparse_config/SuiteSparse_config.c 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/SuiteSparse_config/SuiteSparse_config.c 2024-08-30 22:55:25
@@ -72,8 +72,8 @@
/* MATLAB mexFunction: */
mexPrintf,
#else
- /* standard ANSI C: */
- printf,
+#include <R_ext/Print.h>
+ Rprintf,
#endif
#else
/* printf is disabled */
diff -ruN src/SuiteSparse/SuiteSparse_config/SuiteSparse_config.h src/SuiteSparse-patched/SuiteSparse_config/SuiteSparse_config.h
--- src/SuiteSparse/SuiteSparse_config/SuiteSparse_config.h 2024-01-24 19:45:24
+++ src/SuiteSparse-patched/SuiteSparse_config/SuiteSparse_config.h 2024-08-30 22:55:25
@@ -41,6 +41,33 @@
#include <stdarg.h>
#include <ctype.h>
+#ifndef INT32_MAX
+# define int32_t long
+# define INT32_MIN LONG_MIN
+# define INT32_MAX LONG_MAX
+# define PRId32 "ld"
+# define SCNd32 "ld"
+#endif
+#ifndef INT64_MAX
+# define int64_t long long
+# define INT64_MIN LLONG_MIN
+# define INT64_MAX LLONG_MAX
+# define PRId64 "lld"
+# define SCNd64 "lld"
+#endif
+#ifndef UINT32_MAX
+# define uint32_t unsigned long
+# define UINT32_MAX ULONG_MAX
+# define PRIu32 "lu"
+# define SCNu32 "lu"
+#endif
+#ifndef UINT64_MAX
+# define uint64_t unsigned long long
+# define UINT64_MAX ULLONG_MAX
+# define PRIu64 "llu"
+# define SCNu64 "llu"
+#endif
+
//------------------------------------------------------------------------------
// SuiteSparse_long is now int64_t in SuiteSparse v6.0.0 and later
//------------------------------------------------------------------------------
@@ -677,6 +704,19 @@
#if defined ( SUITESPARSE_BLAS_DEFINITIONS )
+#ifndef USE_FC_LEN_T
+# define USE_FC_LEN_T
+#endif
+#include <Rconfig.h>
+
+#ifdef FC_LEN_T
+# define FCLEN , FC_LEN_T
+# define FCONE , (FC_LEN_T) 1
+#else
+# define FCLEN
+# define FCONE
+#endif
+
//------------------------------------------------------------------------------
// gemv: Y = alpha*A*x + beta*Y
//------------------------------------------------------------------------------
@@ -696,7 +736,7 @@
// input/output:
double *Y,
// input:
- const SUITESPARSE_BLAS_INT *incy
+ const SUITESPARSE_BLAS_INT *incy FCLEN
) ;
#define SUITESPARSE_BLAS_dgemv(trans,m,n,alpha,A,lda,X,incx,beta,Y,incy,ok) \
@@ -709,7 +749,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_DGEMV (trans, &M_blas_int, &N_blas_int, alpha, A, \
- &LDA_blas_int, X, &INCX_blas_int, beta, Y, &INCY_blas_int) ; \
+ &LDA_blas_int, X, &INCX_blas_int, beta, Y, &INCY_blas_int FCONE) ; \
} \
}
@@ -728,7 +768,7 @@
// input/output:
float *Y,
// input:
- const SUITESPARSE_BLAS_INT *incy
+ const SUITESPARSE_BLAS_INT *incy FCLEN
) ;
#define SUITESPARSE_BLAS_sgemv(trans,m,n,alpha,A,lda,X,incx,beta,Y,incy,ok) \
@@ -741,7 +781,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_SGEMV (trans, &M_blas_int, &N_blas_int, alpha, A, \
- &LDA_blas_int, X, &INCX_blas_int, beta, Y, &INCY_blas_int) ; \
+ &LDA_blas_int, X, &INCX_blas_int, beta, Y, &INCY_blas_int FCONE) ; \
} \
}
@@ -760,7 +800,7 @@
// input/output:
void *Y,
// input:
- const SUITESPARSE_BLAS_INT *incy
+ const SUITESPARSE_BLAS_INT *incy FCLEN
) ;
#define SUITESPARSE_BLAS_zgemv(trans,m,n,alpha,A,lda,X,incx,beta,Y,incy,ok) \
@@ -773,7 +813,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_ZGEMV (trans, &M_blas_int, &N_blas_int, alpha, A, \
- &LDA_blas_int, X, &INCX_blas_int, beta, Y, &INCY_blas_int) ; \
+ &LDA_blas_int, X, &INCX_blas_int, beta, Y, &INCY_blas_int FCONE) ; \
} \
}
@@ -792,7 +832,7 @@
// input/output:
void *Y,
// input:
- const SUITESPARSE_BLAS_INT *incy
+ const SUITESPARSE_BLAS_INT *incy FCLEN
) ;
#define SUITESPARSE_BLAS_cgemv(trans,m,n,alpha,A,lda,X,incx,beta,Y,incy,ok) \
@@ -805,7 +845,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_CGEMV (trans, &M_blas_int, &N_blas_int, alpha, A, \
- &LDA_blas_int, X, &INCX_blas_int, beta, Y, &INCY_blas_int) ; \
+ &LDA_blas_int, X, &INCX_blas_int, beta, Y, &INCY_blas_int FCONE) ; \
} \
}
@@ -825,7 +865,7 @@
// input/output:
double *X,
// input:
- const SUITESPARSE_BLAS_INT *incx
+ const SUITESPARSE_BLAS_INT *incx FCLEN FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_dtrsv(uplo,trans,diag,n,A,lda,X,incx,ok) \
@@ -836,7 +876,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_DTRSV (uplo, trans, diag, &N_blas_int, A, \
- &LDA_blas_int, X, &INCX_blas_int) ; \
+ &LDA_blas_int, X, &INCX_blas_int FCONE FCONE FCONE) ; \
} \
}
@@ -852,7 +892,7 @@
// input/output:
float *X,
// input:
- const SUITESPARSE_BLAS_INT *incx
+ const SUITESPARSE_BLAS_INT *incx FCLEN FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_strsv(uplo,trans,diag,n,A,lda,X,incx,ok) \
@@ -863,7 +903,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_STRSV (uplo, trans, diag, &N_blas_int, A, \
- &LDA_blas_int, X, &INCX_blas_int) ; \
+ &LDA_blas_int, X, &INCX_blas_int FCONE FCONE FCONE) ; \
} \
}
@@ -879,7 +919,7 @@
// input/output:
void *X,
// input:
- const SUITESPARSE_BLAS_INT *incx
+ const SUITESPARSE_BLAS_INT *incx FCLEN FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_ztrsv(uplo,trans,diag,n,A,lda,X,incx,ok) \
@@ -890,7 +930,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_ZTRSV (uplo, trans, diag, &N_blas_int, A, \
- &LDA_blas_int, X, &INCX_blas_int) ; \
+ &LDA_blas_int, X, &INCX_blas_int FCONE FCONE FCONE) ; \
} \
}
@@ -906,7 +946,7 @@
// input/output:
void *X,
// input:
- const SUITESPARSE_BLAS_INT *incx
+ const SUITESPARSE_BLAS_INT *incx FCLEN FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_ctrsv(uplo,trans,diag,n,A,lda,X,incx,ok) \
@@ -917,7 +957,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_CTRSV (uplo, trans, diag, &N_blas_int, A, \
- &LDA_blas_int, X, &INCX_blas_int) ; \
+ &LDA_blas_int, X, &INCX_blas_int FCONE FCONE FCONE) ; \
} \
}
@@ -940,7 +980,7 @@
// input/output:
double *B,
// input:
- const SUITESPARSE_BLAS_INT *ldb
+ const SUITESPARSE_BLAS_INT *ldb FCLEN FCLEN FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_dtrsm(side,uplo,transa,diag,m,n,alpha,A,lda,B,ldb,ok)\
@@ -952,7 +992,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_DTRSM (side, uplo, transa, diag, &M_blas_int, \
- &N_blas_int, alpha, A, &LDA_blas_int, B, &LDB_blas_int) ; \
+ &N_blas_int, alpha, A, &LDA_blas_int, B, &LDB_blas_int FCONE FCONE FCONE FCONE) ; \
} \
}
@@ -971,7 +1011,7 @@
// input/output:
float *B,
// input:
- const SUITESPARSE_BLAS_INT *ldb
+ const SUITESPARSE_BLAS_INT *ldb FCLEN FCLEN FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_strsm(side,uplo,transa,diag,m,n,alpha,A,lda,B,ldb,ok)\
@@ -983,7 +1023,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_STRSM (side, uplo, transa, diag, &M_blas_int, \
- &N_blas_int, alpha, A, &LDA_blas_int, B, &LDB_blas_int) ; \
+ &N_blas_int, alpha, A, &LDA_blas_int, B, &LDB_blas_int FCONE FCONE FCONE FCONE) ; \
} \
}
@@ -1002,7 +1042,7 @@
// input/output:
void *B,
// input:
- const SUITESPARSE_BLAS_INT *ldb
+ const SUITESPARSE_BLAS_INT *ldb FCLEN FCLEN FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_ztrsm(side,uplo,transa,diag,m,n,alpha,A,lda,B,ldb,ok)\
@@ -1014,7 +1054,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_ZTRSM (side, uplo, transa, diag, &M_blas_int, \
- &N_blas_int, alpha, A, &LDA_blas_int, B, &LDB_blas_int) ; \
+ &N_blas_int, alpha, A, &LDA_blas_int, B, &LDB_blas_int FCONE FCONE FCONE FCONE) ; \
} \
}
@@ -1033,7 +1073,7 @@
// input/output:
void *B,
// input:
- const SUITESPARSE_BLAS_INT *ldb
+ const SUITESPARSE_BLAS_INT *ldb FCLEN FCLEN FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_ctrsm(side,uplo,transa,diag,m,n,alpha,A,lda,B,ldb,ok)\
@@ -1045,7 +1085,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_CTRSM (side, uplo, transa, diag, &M_blas_int, \
- &N_blas_int, alpha, A, &LDA_blas_int, B, &LDB_blas_int) ; \
+ &N_blas_int, alpha, A, &LDA_blas_int, B, &LDB_blas_int FCONE FCONE FCONE FCONE) ; \
} \
}
@@ -1070,7 +1110,7 @@
// input/output:
double *C,
// input:
- const SUITESPARSE_BLAS_INT *ldc
+ const SUITESPARSE_BLAS_INT *ldc FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_dgemm(transa,transb,m,n,k,alpha,A,lda,B,ldb,beta, \
@@ -1086,7 +1126,7 @@
{ \
SUITESPARSE_BLAS_DGEMM (transa, transb, &M_blas_int, &N_blas_int, \
&K_blas_int, alpha, A, &LDA_blas_int, B, &LDB_blas_int, beta, C, \
- &LDC_blas_int) ; \
+ &LDC_blas_int FCONE FCONE) ; \
} \
}
@@ -1107,7 +1147,7 @@
// input/output:
float *C,
// input:
- const SUITESPARSE_BLAS_INT *ldc
+ const SUITESPARSE_BLAS_INT *ldc FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_sgemm(transa,transb,m,n,k,alpha,A,lda,B,ldb,beta, \
@@ -1123,7 +1163,7 @@
{ \
SUITESPARSE_BLAS_SGEMM (transa, transb, &M_blas_int, &N_blas_int, \
&K_blas_int, alpha, A, &LDA_blas_int, B, &LDB_blas_int, beta, C, \
- &LDC_blas_int) ; \
+ &LDC_blas_int FCONE FCONE) ; \
} \
}
@@ -1144,7 +1184,7 @@
// input/output:
void *C,
// input:
- const SUITESPARSE_BLAS_INT *ldc
+ const SUITESPARSE_BLAS_INT *ldc FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_zgemm(transa,transb,m,n,k,alpha,A,lda,B,ldb,beta, \
@@ -1160,7 +1200,7 @@
{ \
SUITESPARSE_BLAS_ZGEMM (transa, transb, &M_blas_int, &N_blas_int, \
&K_blas_int, alpha, A, &LDA_blas_int, B, &LDB_blas_int, beta, C, \
- &LDC_blas_int) ; \
+ &LDC_blas_int FCONE FCONE) ; \
} \
}
@@ -1181,7 +1221,7 @@
// input/output:
void *C,
// input:
- const SUITESPARSE_BLAS_INT *ldc
+ const SUITESPARSE_BLAS_INT *ldc FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_cgemm(transa,transb,m,n,k,alpha,A,lda,B,ldb,beta, \
@@ -1197,7 +1237,7 @@
{ \
SUITESPARSE_BLAS_CGEMM (transa, transb, &M_blas_int, &N_blas_int, \
&K_blas_int, alpha, A, &LDA_blas_int, B, &LDB_blas_int, beta, C, \
- &LDC_blas_int) ; \
+ &LDC_blas_int FCONE FCONE) ; \
} \
}
@@ -1219,7 +1259,7 @@
// input/output:
double *C,
// input:
- const SUITESPARSE_BLAS_INT *ldc
+ const SUITESPARSE_BLAS_INT *ldc FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_dsyrk(uplo,trans,n,k,alpha,A,lda,beta,C,ldc,ok) \
@@ -1231,7 +1271,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_DSYRK (uplo, trans, &N_blas_int, &K_blas_int, alpha, \
- A, &LDA_blas_int, beta, C, &LDC_blas_int) ; \
+ A, &LDA_blas_int, beta, C, &LDC_blas_int FCONE FCONE) ; \
} \
}
@@ -1249,7 +1289,7 @@
// input/output:
float *C,
// input:
- const SUITESPARSE_BLAS_INT *ldc
+ const SUITESPARSE_BLAS_INT *ldc FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_ssyrk(uplo,trans,n,k,alpha,A,lda,beta,C,ldc,ok) \
@@ -1261,7 +1301,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_SSYRK (uplo, trans, &N_blas_int, &K_blas_int, alpha, \
- A, &LDA_blas_int, beta, C, &LDC_blas_int) ; \
+ A, &LDA_blas_int, beta, C, &LDC_blas_int FCONE FCONE) ; \
} \
}
@@ -1279,7 +1319,7 @@
// input/output:
void *C,
// input:
- const SUITESPARSE_BLAS_INT *ldc
+ const SUITESPARSE_BLAS_INT *ldc FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_zherk(uplo,trans,n,k,alpha,A,lda,beta,C,ldc,ok) \
@@ -1291,7 +1331,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_ZHERK (uplo, trans, &N_blas_int, &K_blas_int, alpha, \
- A, &LDA_blas_int, beta, C, &LDC_blas_int) ; \
+ A, &LDA_blas_int, beta, C, &LDC_blas_int FCONE FCONE) ; \
} \
}
@@ -1309,7 +1349,7 @@
// input/output:
void *C,
// input:
- const SUITESPARSE_BLAS_INT *ldc
+ const SUITESPARSE_BLAS_INT *ldc FCLEN FCLEN
) ;
#define SUITESPARSE_BLAS_cherk(uplo,trans,n,k,alpha,A,lda,beta,C,ldc,ok) \
@@ -1321,7 +1361,7 @@
if (ok) \
{ \
SUITESPARSE_BLAS_CHERK (uplo, trans, &N_blas_int, &K_blas_int, alpha, \
- A, &LDA_blas_int, beta, C, &LDC_blas_int) ; \
+ A, &LDA_blas_int, beta, C, &LDC_blas_int FCONE FCONE) ; \
} \
}
@@ -1339,7 +1379,7 @@
// input:
const SUITESPARSE_BLAS_INT *lda,
// output:
- SUITESPARSE_BLAS_INT *info
+ SUITESPARSE_BLAS_INT *info FCLEN
) ;
#define SUITESPARSE_LAPACK_dpotrf(uplo,n,A,lda,info,ok) \
@@ -1351,7 +1391,7 @@
{ \
SUITESPARSE_BLAS_INT LAPACK_Info = -999 ; \
SUITESPARSE_LAPACK_DPOTRF (uplo, &N_blas_int, A, &LDA_blas_int, \
- &LAPACK_Info) ; \
+ &LAPACK_Info FCONE) ; \
info = (Int) LAPACK_Info ; \
} \
}
@@ -1366,7 +1406,7 @@
// input:
const SUITESPARSE_BLAS_INT *lda,
// output:
- SUITESPARSE_BLAS_INT *info
+ SUITESPARSE_BLAS_INT *info FCLEN
) ;
#define SUITESPARSE_LAPACK_spotrf(uplo,n,A,lda,info,ok) \
@@ -1378,7 +1418,7 @@
{ \
SUITESPARSE_BLAS_INT LAPACK_Info = -999 ; \
SUITESPARSE_LAPACK_SPOTRF (uplo, &N_blas_int, A, &LDA_blas_int, \
- &LAPACK_Info) ; \
+ &LAPACK_Info FCONE) ; \
info = (Int) LAPACK_Info ; \
} \
}
@@ -1393,7 +1433,7 @@
// input:
const SUITESPARSE_BLAS_INT *lda,
// output:
- SUITESPARSE_BLAS_INT *info
+ SUITESPARSE_BLAS_INT *info FCLEN
) ;
#define SUITESPARSE_LAPACK_zpotrf(uplo,n,A,lda,info,ok) \
@@ -1405,7 +1445,7 @@
{ \
SUITESPARSE_BLAS_INT LAPACK_Info = -999 ; \
SUITESPARSE_LAPACK_ZPOTRF (uplo, &N_blas_int, A, &LDA_blas_int, \
- &LAPACK_Info) ; \
+ &LAPACK_Info FCONE) ; \
info = LAPACK_Info ; \
} \
}
@@ -1420,7 +1460,7 @@
// input:
const SUITESPARSE_BLAS_INT *lda,
// output:
- SUITESPARSE_BLAS_INT *info
+ SUITESPARSE_BLAS_INT *info FCLEN
) ;
#define SUITESPARSE_LAPACK_cpotrf(uplo,n,A,lda,info,ok) \
@@ -1432,7 +1472,7 @@
{ \
SUITESPARSE_BLAS_INT LAPACK_Info = -999 ; \
SUITESPARSE_LAPACK_CPOTRF (uplo, &N_blas_int, A, &LDA_blas_int, \
- &LAPACK_Info) ; \
+ &LAPACK_Info FCONE) ; \
info = LAPACK_Info ; \
} \
}
@@ -1666,7 +1706,7 @@
// output:
double *T,
// input:
- const SUITESPARSE_BLAS_INT *ldt
+ const SUITESPARSE_BLAS_INT *ldt FCLEN FCLEN
) ;
#define SUITESPARSE_LAPACK_dlarft(direct,storev,n,k,V,ldv,Tau,T,ldt,ok) \
@@ -1678,7 +1718,7 @@
if (ok) \
{ \
SUITESPARSE_LAPACK_DLARFT (direct, storev, &N_blas_int, &K_blas_int, \
- V, &LDV_blas_int, Tau, T, &LDT_blas_int) ; \
+ V, &LDV_blas_int, Tau, T, &LDT_blas_int FCONE FCONE) ; \
} \
}
@@ -1695,7 +1735,7 @@
// output:
float *T,
// input:
- const SUITESPARSE_BLAS_INT *ldt
+ const SUITESPARSE_BLAS_INT *ldt FCLEN FCLEN
) ;
#define SUITESPARSE_LAPACK_slarft(direct,storev,n,k,V,ldv,Tau,T,ldt,ok) \
@@ -1707,7 +1747,7 @@
if (ok) \
{ \
SUITESPARSE_LAPACK_SLARFT (direct, storev, &N_blas_int, &K_blas_int, \
- V, &LDV_blas_int, Tau, T, &LDT_blas_int) ; \
+ V, &LDV_blas_int, Tau, T, &LDT_blas_int FCONE FCONE) ; \
} \
}
@@ -1724,7 +1764,7 @@
// output:
void *T,
// input:
- const SUITESPARSE_BLAS_INT *ldt
+ const SUITESPARSE_BLAS_INT *ldt FCLEN FCLEN
) ;
#define SUITESPARSE_LAPACK_zlarft(direct,storev,n,k,V,ldv,Tau,T,ldt,ok) \
@@ -1736,7 +1776,7 @@
if (ok) \
{ \
SUITESPARSE_LAPACK_ZLARFT (direct, storev, &N_blas_int, &K_blas_int, \
- V, &LDV_blas_int, Tau, T, &LDT_blas_int) ; \
+ V, &LDV_blas_int, Tau, T, &LDT_blas_int FCONE FCONE) ; \
} \
}
@@ -1753,7 +1793,7 @@
// output:
void *T,
// input:
- const SUITESPARSE_BLAS_INT *ldt
+ const SUITESPARSE_BLAS_INT *ldt FCLEN FCLEN
) ;
#define SUITESPARSE_LAPACK_clarft(direct,storev,n,k,V,ldv,Tau,T,ldt,ok) \
@@ -1765,7 +1805,7 @@
if (ok) \
{ \
SUITESPARSE_LAPACK_CLARFT (direct, storev, &N_blas_int, &K_blas_int, \
- V, &LDV_blas_int, Tau, T, &LDT_blas_int) ; \
+ V, &LDV_blas_int, Tau, T, &LDT_blas_int FCONE FCONE) ; \
} \
}
@@ -1794,7 +1834,7 @@
// workspace:
double *Work,
// input:
- const SUITESPARSE_BLAS_INT *ldwork
+ const SUITESPARSE_BLAS_INT *ldwork FCLEN FCLEN FCLEN FCLEN
) ;
#define SUITESPARSE_LAPACK_dlarfb(side,trans,direct,storev,m,n,k,V,ldv,T,ldt, \
@@ -1811,7 +1851,7 @@
{ \
SUITESPARSE_LAPACK_DLARFB (side, trans, direct, storev, &M_blas_int, \
&N_blas_int, &K_blas_int, V, &LDV_blas_int, T, &LDT_blas_int, C, \
- &LDC_blas_int, Work, &LDWORK_blas_int) ; \
+ &LDC_blas_int, Work, &LDWORK_blas_int FCONE FCONE FCONE FCONE) ; \
} \
}
@@ -1836,7 +1876,7 @@
// workspace:
float *Work,
// input:
- const SUITESPARSE_BLAS_INT *ldwork
+ const SUITESPARSE_BLAS_INT *ldwork FCLEN FCLEN FCLEN FCLEN
) ;
#define SUITESPARSE_LAPACK_slarfb(side,trans,direct,storev,m,n,k,V,ldv,T,ldt, \
@@ -1853,7 +1893,7 @@
{ \
SUITESPARSE_LAPACK_SLARFB (side, trans, direct, storev, &M_blas_int, \
&N_blas_int, &K_blas_int, V, &LDV_blas_int, T, &LDT_blas_int, C, \
- &LDC_blas_int, Work, &LDWORK_blas_int) ; \
+ &LDC_blas_int, Work, &LDWORK_blas_int FCONE FCONE FCONE FCONE) ; \
} \
}
@@ -1878,7 +1918,7 @@
// workspace:
void *Work,
// input:
- const SUITESPARSE_BLAS_INT *ldwork
+ const SUITESPARSE_BLAS_INT *ldwork FCLEN FCLEN FCLEN FCLEN
) ;
#define SUITESPARSE_LAPACK_zlarfb(side,trans,direct,storev,m,n,k,V,ldv,T,ldt, \
@@ -1895,7 +1935,7 @@
{ \
SUITESPARSE_LAPACK_ZLARFB (side, trans, direct, storev, &M_blas_int, \
&N_blas_int, &K_blas_int, V, &LDV_blas_int, T, &LDT_blas_int, C, \
- &LDC_blas_int, Work, &LDWORK_blas_int) ; \
+ &LDC_blas_int, Work, &LDWORK_blas_int FCONE FCONE FCONE FCONE) ; \
} \
}
@@ -1920,7 +1960,7 @@
// workspace:
void *Work,
// input:
- const SUITESPARSE_BLAS_INT *ldwork
+ const SUITESPARSE_BLAS_INT *ldwork FCLEN FCLEN FCLEN FCLEN
) ;
#define SUITESPARSE_LAPACK_clarfb(side,trans,direct,storev,m,n,k,V,ldv,T,ldt, \
@@ -1937,7 +1977,7 @@
{ \
SUITESPARSE_LAPACK_CLARFB (side, trans, direct, storev, &M_blas_int, \
&N_blas_int, &K_blas_int, V, &LDV_blas_int, T, &LDT_blas_int, C, \
- &LDC_blas_int, Work, &LDWORK_blas_int) ; \
+ &LDC_blas_int, Work, &LDWORK_blas_int FCONE FCONE FCONE FCONE) ; \
} \
}
@@ -2139,7 +2179,7 @@
// input:
const SUITESPARSE_BLAS_INT *ldc,
// workspace:
- double *Work
+ double *Work FCLEN
) ;
#define SUITESPARSE_LAPACK_dlarf(side,m,n,V,incv,tau,C,ldc,Work,ok) \
@@ -2151,7 +2191,7 @@
if (ok) \
{ \
SUITESPARSE_LAPACK_DLARF (side, &M_blas_int, &N_blas_int, V, \
- &INCV_blas_int, tau, C, &LDC_blas_int, Work) ; \
+ &INCV_blas_int, tau, C, &LDC_blas_int, Work FCONE) ; \
} \
}
@@ -2169,7 +2209,7 @@
// input:
const SUITESPARSE_BLAS_INT *ldc,
// workspace:
- float *Work
+ float *Work FCLEN
) ;
#define SUITESPARSE_LAPACK_slarf(side,m,n,V,incv,tau,C,ldc,Work,ok) \
@@ -2181,7 +2221,7 @@
if (ok) \
{ \
SUITESPARSE_LAPACK_SLARF (side, &M_blas_int, &N_blas_int, V, \
- &INCV_blas_int, tau, C, &LDC_blas_int, Work) ; \
+ &INCV_blas_int, tau, C, &LDC_blas_int, Work FCONE) ; \
} \
}
@@ -2199,7 +2239,7 @@
// input:
const SUITESPARSE_BLAS_INT *ldc,
// workspace:
- void *Work
+ void *Work FCLEN
) ;
#define SUITESPARSE_LAPACK_zlarf(side,m,n,V,incv,tau,C,ldc,Work,ok) \
@@ -2211,7 +2251,7 @@
if (ok) \
{ \
SUITESPARSE_LAPACK_ZLARF (side, &M_blas_int, &N_blas_int, V, \
- &INCV_blas_int, tau, C, &LDC_blas_int, Work) ; \
+ &INCV_blas_int, tau, C, &LDC_blas_int, Work FCONE) ; \
} \
}
@@ -2229,7 +2269,7 @@
// input:
const SUITESPARSE_BLAS_INT *ldc,
// workspace:
- void *Work
+ void *Work FCLEN
) ;
#define SUITESPARSE_LAPACK_clarf(side,m,n,V,incv,tau,C,ldc,Work,ok) \
@@ -2241,7 +2281,7 @@
if (ok) \
{ \
SUITESPARSE_LAPACK_CLARF (side, &M_blas_int, &N_blas_int, V, \
- &INCV_blas_int, tau, C, &LDC_blas_int, Work) ; \
+ &INCV_blas_int, tau, C, &LDC_blas_int, Work FCONE) ; \
} \
}
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