methods-package methods-package $,envRefClass-method stdRefClass $<-,envRefClass-method stdRefClass $<-,localRefClass-method localRefClass (-class LanguageClasses .BasicClasses RClassUtils .BasicFunsList zBasicFunsList .BasicVectorClasses RClassUtils .classEnv RClassUtils .doTracePrint TraceClasses .EmptyPrimitiveSkeletons RMethodUtils .environment-class Classes_Details .externalptr-class Classes_Details .hasSlot slot .InitBasicClasses RClassUtils .InitMethodsListClass RClassUtils .InitTraceFunctions TraceClasses .makeTracedFunction TraceClasses .name-class Classes_Details .NULL-class Classes_Details .OldClassesList setOldClass .Other-class testInheritedMethods .S4methods showMethods .saveImage RMethodUtils .selectSuperClasses selectSuperClasses .setCoerceGeneric RClassUtils .setOldIs setOldClass .ShortPrimitiveSkeletons RMethodUtils .slotNames slot .untracedFunction TraceClasses .valueClassTest RMethodUtils <--class LanguageClasses activeBindingFunction-class refClass addNextMethod RMethodUtils addNextMethod,MethodDefinition-method RMethodUtils addNextMethod,MethodWithNext-method RMethodUtils allGenerics methods-defunct allNames methodUtilities anova-class setOldClass anova.glm-class setOldClass anova.glm.null-class setOldClass ANY-class BasicClasses aov-class setOldClass Arith S4groupGeneric array-class StructureClasses as as as<- as asMethodDefinition RMethodUtils assignClassDef RClassUtils assignMethodsMetaData RMethodUtils balanceMethodsList RMethodUtils body<-,MethodDefinition-method MethodsList-class builtin-class BasicClasses cacheGenericsMetaData RMethodUtils cacheMetaData RMethodUtils cacheMethod MethodSupport call-class LanguageClasses callGeneric callGeneric callNextMethod NextMethod canCoerce canCoerce cbind2 cbind2 cbind2,ANY,ANY-method cbind2 cbind2,ANY,missing-method cbind2 cbind2-methods cbind2 character-class BasicClasses checkAtAssignment RClassUtils checkSlotAssignment RClassUtils Classes Classes classesToAM classesToAM Classes_Details Classes_Details classGeneratorFunction-class setClass classLabel RClassUtils classMetaName RClassUtils className className className-class className classPrototypeDef-class RClassUtils classRepresentation-class classRepresentation-class ClassUnionRepresentation-class setClassUnion coerce setAs coerce,ANY,array-method setAs coerce,ANY,call-method setAs coerce,ANY,character-method setAs coerce,ANY,complex-method setAs coerce,ANY,environment-method setAs coerce,ANY,expression-method setAs coerce,ANY,function-method setAs coerce,ANY,integer-method setAs coerce,ANY,list-method setAs coerce,ANY,logical-method setAs coerce,ANY,matrix-method setAs coerce,ANY,name-method setAs coerce,ANY,NULL-method setAs coerce,ANY,numeric-method setAs coerce,ANY,S3-method S3Part coerce,ANY,S4-method S3Part coerce,ANY,single-method setAs coerce,ANY,ts-method setAs coerce,ANY,vector-method setAs coerce,oldClass,S3-method S3Part coerce-methods setAs coerce<- setAs Compare S4groupGeneric completeClassDefinition RClassUtils completeExtends RClassUtils completeSubclasses RClassUtils Complex S4groupGeneric complex-class BasicClasses conditionalExtension-class RClassUtils conformMethod RMethodUtils data.frame-class setOldClass data.frameRowLabels-class setOldClass Date-class setOldClass defaultBindingFunction-class refClass defaultDumpName RMethodUtils defaultPrototype RClassUtils density-class setOldClass derivedDefaultMethod-class RMethodUtils derivedDefaultMethodWithTrace-class TraceClasses Documentation Documentation Documentation-class Documentation Documentation-methods Documentation doPrimitiveMethod RMethodUtils dotsMethods dotsMethods double-class BasicClasses dump.frames-class setOldClass dumpMethod GenericFunctions dumpMethods GenericFunctions el methodUtilities el<- methodUtilities elNamed methodUtilities elNamed<- methodUtilities empty.dump RClassUtils emptyMethodsList MethodsList EmptyMethodsList-class EmptyMethodsList-class environment-class EnvironmentClass envRefClass-class stdRefClass evalOnLoad setLoadActions evalqOnLoad setLoadActions evalSource evalSource existsFunction methodUtilities existsMethod getMethod expression-class BasicClasses extends is extendsMetaName RClassUtils externalptr-class BasicClasses externalRefMethod refClass externalRefMethod-class refClass factor-class setOldClass finalDefaultMethod MethodsList findClass findClass findFunction GenericFunctions findMethod getMethod findMethods findMethods findMethodSignatures findMethods findUnique RMethodUtils fixPre1.8 fixPrevious for-class LanguageClasses formalArgs methodUtilities formula-class setOldClass function-class BasicClasses functionBody methodUtilities functionBody<- methodUtilities functionWithTrace-class TraceClasses generic.skeleton RMethodUtils genericFunction-class genericFunction-class GenericFunctions GenericFunctions genericFunctionWithTrace-class TraceClasses getAccess methods-defunct getAllMethods methods-defunct getAllSuperClasses RClassUtils getClass getClass getClassDef getClass getClasses findClass getClassName methods-defunct getClassPackage methods-defunct getDataPart RClassUtils getExtends methods-defunct getFunction methodUtilities getGeneric RMethodUtils getGenerics GenericFunctions getGroup RMethodUtils getGroupMembers RMethodUtils getLoadActions setLoadActions getMethod getMethod getMethods findMethods getMethodsForDispatch MethodSupport getMethodsMetaData RMethodUtils getPackageName getPackageName getProperties methods-defunct getPrototype methods-defunct getRefClass refClass getSlots slot getSubclasses methods-defunct getValidity validObject getVirtual methods-defunct glm-class setOldClass glm.null-class setOldClass groupGenericFunction-class genericFunction-class GroupGenericFunctions S4groupGeneric groupGenericFunctionWithTrace-class TraceClasses hasArg hasArg hasLoadAction setLoadActions hasMethod getMethod hasMethods findMethods hsearch-class setOldClass if-class LanguageClasses implicit generic implicitGeneric implicitGeneric implicitGeneric inheritedSlotNames inheritedSlotNames inheritedSubMethodLists MethodsList initFieldArgs refClass initialize new initialize,.environment-method initialize-methods initialize,ANY-method initialize-methods initialize,array-method StructureClasses initialize,data.frame-method setOldClass initialize,environment-method initialize-methods initialize,envRefClass-method stdRefClass initialize,factor-method setOldClass initialize,matrix-method StructureClasses initialize,mts-method StructureClasses initialize,ordered-method setOldClass initialize,signature-method initialize-methods initialize,summary.table-method setOldClass initialize,table-method setOldClass initialize,traceable-method initialize-methods initialize,ts-method StructureClasses initialize-methods initialize-methods initMethodDispatch methodUtilities initRefFields refClass insertClassMethods RMethodUtils insertMethod MethodsList insertMethodInEmptyList MethodsList insertSource evalSource integer-class BasicClasses integrate-class setOldClass internalDispatchMethod-class RMethodUtils Introduction Introduction is is isClass findClass isClassDef RClassUtils isClassUnion setClassUnion isGeneric GenericFunctions isGrammarSymbol languageEl isGroup GenericFunctions isRematched RMethodUtils isSealedClass isSealedMethod isSealedMethod isSealedMethod isVirtualClass RClassUtils isXS3Class S3Part language-class LanguageClasses languageEl languageEl languageEl<- languageEl libraryIQR-class setOldClass linearizeMlist MethodsList LinearMethodsList-class LinearMethodsList-class list-class BasicClasses listFromMethods MethodSupport listFromMlist MethodsList listOfMethods-class findMethods lm-class setOldClass loadMethod MethodsList loadMethod,ANY-method MethodsList loadMethod,MethodDefinition-method MethodsList loadMethod,MethodWithNext-method MethodsList loadMethod-methods MethodsList localRefClass-class localRefClass LocalReferenceClasses localRefClass Logic S4groupGeneric logical-class BasicClasses logLik-class setOldClass makeClassRepresentation setSClass makeExtends RClassUtils makeGeneric RMethodUtils makeMethodsList MethodsList makePrototypeFromClassDef RClassUtils makeStandardGeneric RMethodUtils maov-class setOldClass matchSignature RMethodUtils Math S4groupGeneric Math,nonStructure-method nonStructure-class Math,structure-method StructureClasses Math2 S4groupGeneric Math2,nonStructure-method nonStructure-class matrix-class StructureClasses mergeMethods MethodsList metaNameUndo RClassUtils method.skeleton method.skeleton MethodAddCoerce RMethodUtils MethodDefinition-class MethodDefinition-class MethodDefinitionWithTrace-class TraceClasses Methods Methods methods-defunct methods-defunct methods-deprecated methods-deprecated MethodSelectionReport-class testInheritedMethods methodSignatureMatrix methodUtilities MethodsList MethodsList MethodsList-class MethodsList-class MethodsListSelect MethodsList methodsPackageMetaName RClassUtils Methods_Details Methods_Details Methods_for_Nongenerics Methods_for_Nongenerics Methods_for_S3 Methods_for_S3 MethodWithNext-class MethodWithNext-class MethodWithNextWithTrace-class TraceClasses missing-class BasicClasses missingArg RMethodUtils mlistMetaName methods-defunct mlm-class setOldClass mtable-class setOldClass mts-class setOldClass multipleClasses className name-class LanguageClasses namedList-class BasicClasses new new newBasic RClassUtils newClassRepresentation RClassUtils newEmptyObject RClassUtils nonstandardGeneric-class RMethodUtils nonstandardGenericFunction-class RMethodUtils nonstandardGenericWithTrace-class TraceClasses nonstandardGroupGenericFunction-class RMethodUtils nonStructure-class nonStructure-class NULL-class BasicClasses numeric-class BasicClasses ObjectsWithPackage-class ObjectsWithPackage-class oldClass-class setOldClass Ops S4groupGeneric Ops,array,array-method StructureClasses Ops,array,structure-method StructureClasses Ops,nonStructure,nonStructure-method nonStructure-class Ops,nonStructure,vector-method nonStructure-class Ops,structure,array-method StructureClasses Ops,structure,structure-method StructureClasses Ops,structure,vector-method StructureClasses Ops,vector,nonStructure-method nonStructure-class Ops,vector,structure-method StructureClasses OptionalFunction-class RMethodUtils optionalMethod-class RMethodUtils ordered-class setOldClass packageInfo-class setOldClass packageIQR-class setOldClass packageSlot getPackageName packageSlot<- getPackageName POSIXct-class setOldClass POSIXlt-class setOldClass POSIXt-class setOldClass possibleExtends RClassUtils PossibleMethod-class RMethodUtils print.classRepresentation RClassUtils print.MethodsList MethodsList prohibitGeneric implicitGeneric promptClass promptClass promptMethods promptMethods prototype representation Quote methodUtilities raw-class BasicClasses rbind2 cbind2 rbind2,ANY,ANY-method cbind2 rbind2,ANY,missing-method cbind2 rbind2-methods cbind2 reconcilePropertiesAndPrototype RClassUtils recordedplot-class setOldClass refClass-class refClass refClassRepresentation-class refClass ReferenceClasses refClass refGeneratorSlot-class refClass refMethodDef-class refClass refMethodDefWithTrace-class refClass refObject-class refClass refObjectGenerator-class refClass registerImplicitGenerics implicitGeneric rematchDefinition RMethodUtils removeClass findClass removeGeneric GenericFunctions removeMethod removeMethod removeMethods GenericFunctions removeMethodsObject methods-defunct repeat-class LanguageClasses representation representation requireMethods RClassUtils resetClass findClass resetGeneric MethodSupport rle-class setOldClass S3 S3Part S3-class S3Part S3Class S3Part S3Class<- S3Part S3Part S3Part S3Part<- S3Part S4 S3Part S4-class BasicClasses S4groupGeneric S4groupGeneric SClassExtension-class SClassExtension-class sealClass findClass SealedMethodDefinition-class MethodDefinition-class seemsS4Object methods-defunct selectMethod getMethod selectSuperClasses selectSuperClasses setAs setAs setClass setClass setClassUnion setClassUnion setDataPart RClassUtils setExtendsMetaData RClassUtils setGeneric setGeneric setGenericImplicit implicitGeneric setGroupGeneric setGroupGeneric setIs setIs setLoadAction setLoadActions setLoadActions setLoadActions setMethod setMethod setOldClass setOldClass setPackageName getPackageName setPrimitiveMethods RMethodUtils setRefClass refClass setReplaceMethod GenericFunctions setSubclassMetaData RClassUtils setValidity validObject show show show,ANY-method show show,classRepresentation-method show show,envRefClass-method refClass show,externalRefMethod-method refClass show,genericFunction-method show show,genericFunctionWithTrace-method TraceClasses show,MethodDefinition-method show show,MethodDefinitionWithTrace-method TraceClasses show,MethodWithNext-method show show,MethodWithNextWithTrace-method TraceClasses show,ObjectsWithPackage-method show show,refClassRepresentation-method refClass show,refMethodDef-method refClass show,signature-method signature-class show,sourceEnvironment-method TraceClasses show,traceable-method show show,ts-method StructureClasses show-methods show showClass RClassUtils showDefault methodUtilities showExtends RClassUtils showMethods showMethods showMlist MethodsList signature GenericFunctions signature-class signature-class SignatureMethod MethodsList sigToEnv RMethodUtils single-class BasicClasses slot slot slot<- slot slotNames slot slotsFromS3 S3Part socket-class setOldClass sourceEnvironment-class evalSource special-class BasicClasses standardGeneric-class RMethodUtils standardGenericWithTrace-class RMethodUtils structure-class StructureClasses subclassesMetaName RClassUtils substituteDirect substituteDirect substituteFunctionArgs RMethodUtils Summary S4groupGeneric summary.table-class setOldClass summaryDefault-class setOldClass superClassDepth RClassUtils SuperClassMethod-class refClass table-class setOldClass testInheritedMethods testInheritedMethods testVirtual RClassUtils traceable-class TraceClasses traceOff methods-defunct traceOn methods-defunct tryNew RClassUtils trySilent methods-defunct ts-class StructureClasses uninitializedField-class refClass unRematchDefinition RMethodUtils validObject validObject validSlotNames RClassUtils vector-class BasicClasses VIRTUAL-class BasicClasses while-class LanguageClasses __ClassMetaData Classes_Details {-class LanguageClasses