74 lines
1.4 KiB
Plaintext
74 lines
1.4 KiB
Plaintext
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<%@include file="includes/setup.md.rsp"%>
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<%@string colname="colAnys"%>
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<%@string rowname="rowAnys"%>
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<%@meta title="${colname}() and ${rowname}() benchmarks"%>
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<%@meta author="Henrik Bengtsson"%>
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<%@meta date="2014-11-18"%>
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<%@include file="${header}"%>
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# <%@meta name="title"%>
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This report benchmark the performance of <%=colname%>() and <%=rowname%>() against alternative methods.
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## Alternative methods
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* apply() + any()
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* colSums() > 0 or rowSums() > 0
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## Data
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```r
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<%=withCapture({
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<%@include file="R/random-matrices.R"%>
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data <- rmatrices(mode = "logical")
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})%>
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```
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## Results
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<% for (dataLabel in names(data)) { %>
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<% message(dataLabel) %>
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### <%=dataLabel%> matrix
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```r
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<%=withCapture({
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X <- data[[.dataLabel.]]
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gc()
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colStats <- microbenchmark(
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colAnys = colAnys(X),
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"apply+any" = apply(X, MARGIN = 2L, FUN = any),
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"colSums > 0" = (colSums(X) > 0L),
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unit = "ms"
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)
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X <- t(X)
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gc()
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rowStats <- microbenchmark(
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rowAnys = rowAnys(X),
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"apply+any" = apply(X, MARGIN = 1L, FUN = any),
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"rowSums > 0" = (rowSums(X) > 0L),
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unit = "ms"
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)
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})%>
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```
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<% crBenchmarkResults(colStats, rowStats, tags=dataLabel) %>
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<% } # for (dataLabel ...) %>
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<%@include file="${footer}"%>
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<%---------------------------------------------------------------------------
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HISTORY:
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2014-11-18
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o Created.
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---------------------------------------------------------------------------%>
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