81 lines
3.9 KiB
Plaintext
81 lines
3.9 KiB
Plaintext
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Package: seriation
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Type: Package
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Title: Infrastructure for Ordering Objects Using Seriation
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Version: 1.5.7
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Date: 2024-12-05
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Authors@R: c(
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person("Michael", "Hahsler", role = c("aut", "cre", "cph"),
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email = "mhahsler@lyle.smu.edu",
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comment = c(ORCID = "0000-0003-2716-1405")),
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person("Christian", "Buchta", role = c("aut", "cph")),
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person("Kurt", "Hornik", role = c("aut", "cph"),
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comment = c(ORCID = "0000-0003-4198-9911")),
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person("David", "Barnett", role = c("ctb")),
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person("Michael", "Brusco", role = c("ctb", "cph")),
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person("Michael", "Friendly", role = c("ctb")),
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person("Hans-Friedrich", "Koehn", role = c("ctb", "cph")),
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person("Fionn", "Murtagh", role = c("ctb", "cph")),
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person("Stephanie", "Stahl", role = c("ctb", "cph")))
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Description: Infrastructure for ordering objects with an implementation of several
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seriation/sequencing/ordination techniques to reorder matrices, dissimilarity
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matrices, and dendrograms. Also provides (optimally) reordered heatmaps,
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color images and clustering visualizations like dissimilarity plots, and
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visual assessment of cluster tendency plots (VAT and iVAT). Hahsler et al (2008) <doi:10.18637/jss.v025.i03>.
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Classification/ACM: G.1.6, G.2.1, G.4
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URL: https://github.com/mhahsler/seriation
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BugReports: https://github.com/mhahsler/seriation/issues
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Depends: R (>= 2.14.0)
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Imports: ca, cluster, colorspace, foreach, gclus, grDevices, grid,
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MASS, qap, registry, stats, TSP, vegan
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Suggests: dbscan, DendSer, dendextend, doParallel, GA, ggplot2, keras,
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Rtsne, scales, smacof, tensorflow, testthat, umap
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Encoding: UTF-8
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RoxygenNote: 7.3.2
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License: GPL-3
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Copyright: The code in src/bbwrcg.f, src/arsa.f and src/bburcg.f are
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Copyright (C) 2005 M. Brusco, H.F. Koehn, and S. Stahl. All
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other code is Copyright (C) Michael Hahsler, Christian Buchta,
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and Kurt Hornik.
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Collate: 'AAA_check_installed.R' 'AAA_color_palette.R' 'AAA_defaults.R'
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'AAA_map.R' 'AAA_parameters.R' 'AAA_registry_criterion.R'
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'AAA_registry_seriate.R' 'AAA_seriation-package.R'
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'Chameleon.R' 'Irish.R' 'Munsingen.R' 'Psych24.R'
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'SupremeCourt.R' 'Townships.R' 'VAT.R' 'Wood.R' 'Zoo.R'
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'bertinplot.R' 'criterion.R' 'criterion.array.R'
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'criterion.dist.R' 'criterion.matrix.R' 'dissplot.R'
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'get_order.R' 'ggVAT.R' 'ggbertinplot.R' 'ggdissplot.R'
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'hmap.R' 'gghmap.R' 'pimage.R' 'ggpimage.R' 'grid_helpers.R'
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'lines_and_ordered_data.R' 'lle.R' 'permute.R'
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'register_DendSer.R' 'register_GA.R' 'register_optics.R'
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'register_smacof.R' 'register_tsne.R' 'register_umap.R'
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'reorder.hclust.R' 'robinson.R' 'ser_dist.R'
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'ser_permutation.R' 'ser_permutation_vector.R'
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'ser_permutation_vector2matrix.R' 'seriate.R' 'seriate.dist.R'
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'seriate.matrix.R' 'seriate.array.R' 'seriate.data.frame.R'
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'seriate.table.R' 'seriate_AOE.R' 'seriate_ARSA_Branch-Bound.R'
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'seriate_TSP.R' 'seriate_BEA.R' 'seriate_BK.R' 'seriate_CA.R'
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'seriate_GSA.R' 'seriate_HC.R' 'seriate_LLE.R' 'seriate_MDS.R'
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'seriate_Mean.R' 'seriate_PCA.R' 'seriate_QAP.R'
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'seriate_R2E.R' 'seriate_SGD.R' 'seriate_SPIN.R'
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'seriate_VAT.R' 'seriate_best.R' 'seriate_enumerate.R'
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'seriate_heatmap.R' 'seriate_identity.R' 'seriate_random.R'
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'seriate_reverse.R' 'seriate_spectral.R' 'seriate_vegan.R'
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'uniscale.R'
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NeedsCompilation: yes
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Packaged: 2024-12-05 17:58:49 UTC; hahsler
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Author: Michael Hahsler [aut, cre, cph]
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(<https://orcid.org/0000-0003-2716-1405>),
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Christian Buchta [aut, cph],
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Kurt Hornik [aut, cph] (<https://orcid.org/0000-0003-4198-9911>),
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David Barnett [ctb],
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Michael Brusco [ctb, cph],
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Michael Friendly [ctb],
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Hans-Friedrich Koehn [ctb, cph],
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Fionn Murtagh [ctb, cph],
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Stephanie Stahl [ctb, cph]
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Maintainer: Michael Hahsler <mhahsler@lyle.smu.edu>
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Repository: CRAN
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Date/Publication: 2024-12-05 18:40:01 UTC
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Built: R 4.4.2; x86_64-w64-mingw32; 2025-01-09 03:16:39 UTC; windows
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Archs: x64
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