325 lines
10 KiB
Plaintext
325 lines
10 KiB
Plaintext
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useDynLib("clue", .registration = TRUE, .fixes = "C_")
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import("stats")
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importFrom("graphics", "par", "plot")
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importFrom("cluster", "clara", "pam", "silhouette")
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export("cl_agreement",
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"cl_bag",
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"cl_boot",
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"cl_consensus",
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"cl_dissimilarity",
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"cl_ensemble", "as.cl_ensemble", "is.cl_ensemble",
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"cl_fuzziness",
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"cl_join",
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"cl_margin",
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"cl_meet",
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"cl_medoid",
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"cl_membership", "as.cl_membership",
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"cl_object_names",
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"cl_pam",
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"cl_pclust",
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"cl_predict",
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"cl_prototypes",
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"cl_tabulate",
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"cl_ultrametric", "as.cl_ultrametric",
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"ls_fit_addtree",
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"ls_fit_centroid",
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"ls_fit_ultrametric",
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"ls_fit_sum_of_ultrametrics",
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"ls_fit_ultrametric_target",
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"l1_fit_ultrametric",
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"l1_fit_ultrametric_target",
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"cl_validity",
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"n_of_objects",
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"n_of_classes",
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"cl_class_ids", "as.cl_class_ids",
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"cl_classes",
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"is.cl_partition", "as.cl_partition",
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"is.cl_hard_partition", "as.cl_hard_partition",
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"is.cl_soft_partition", "is.cl_dendrogram",
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"as.cl_dendrogram",
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"is.cl_hierarchy", "as.cl_hierarchy",
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"as.cl_addtree",
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"kmedoids",
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"pclust", "pclust_family", "pclust_object",
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"solve_LSAP",
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"sumt")
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## S3 methods, sorted alphabetically.
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S3method("[", "cl_agreement")
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S3method("[", "cl_dissimilarity")
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S3method("[", "cl_ensemble")
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S3method("[", "cl_proximity")
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S3method("Complex", "cl_hierarchy")
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S3method("Complex", "cl_partition")
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S3method("Math", "cl_hierarchy")
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S3method("Math", "cl_partition")
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S3method("Ops", "cl_dendrogram")
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S3method("Ops", "cl_hierarchy")
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S3method("Ops", "cl_partition")
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S3method("Summary", "cl_hierarchy")
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S3method("Summary", "cl_partition")
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S3method("Summary", "cl_partition_ensemble")
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S3method("as.cl_addtree", "default")
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S3method("as.cl_addtree", "phylo")
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S3method("as.cl_membership", "default")
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S3method("as.cl_membership", "matrix")
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S3method("as.cl_ultrametric", "default")
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S3method("as.cl_ultrametric", "matrix")
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S3method("as.dendrogram", "cl_ultrametric")
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S3method("as.dist", "cl_dissimilarity")
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S3method("as.hclust", "cl_hierarchy")
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S3method("as.hclust", "cl_ultrametric")
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S3method("as.hclust", "mona")
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S3method("as.matrix", "cl_proximity")
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S3method("as.matrix", "hclust")
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S3method("c", "cl_ensemble")
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S3method("cl_class_ids", "Mclust")
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S3method("cl_class_ids", "Weka_clusterer")
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S3method("cl_class_ids", "bclust")
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S3method("cl_class_ids", "ccfkms")
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S3method("cl_class_ids", "cclust")
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S3method("cl_class_ids", "cl_class_ids")
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S3method("cl_class_ids", "cl_membership")
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S3method("cl_class_ids", "cl_pam")
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S3method("cl_class_ids", "cl_partition")
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S3method("cl_class_ids", "cl_partition_by_class_ids")
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S3method("cl_class_ids", "cshell")
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S3method("cl_class_ids", "default")
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S3method("cl_class_ids", "fclust")
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S3method("cl_class_ids", "flexmix")
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S3method("cl_class_ids", "kcca")
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S3method("cl_class_ids", "kmeans")
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S3method("cl_class_ids", "kmedoids")
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S3method("cl_class_ids", "movMF")
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S3method("cl_class_ids", "partition")
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S3method("cl_class_ids", "pclust")
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S3method("cl_class_ids", "relation")
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S3method("cl_class_ids", "rock")
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S3method("cl_class_ids", "specc")
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S3method("cl_classes", "cl_hierarchy")
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S3method("cl_classes", "cl_partition")
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S3method("cl_classes", "cl_ultrametric")
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S3method("cl_classes", "default")
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S3method("cl_membership", "Mclust")
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S3method("cl_membership", "bclust")
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S3method("cl_membership", "cclust")
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S3method("cl_membership", "cl_membership")
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S3method("cl_membership", "cl_partition")
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S3method("cl_membership", "cshell")
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S3method("cl_membership", "default")
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S3method("cl_membership", "fanny")
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S3method("cl_membership", "fclust")
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S3method("cl_membership", "flexmix")
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S3method("cl_membership", "kmeans")
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S3method("cl_membership", "movMF")
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S3method("cl_membership", "partition")
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S3method("cl_membership", "pclust")
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S3method("cl_object_names", "cl_ensemble")
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S3method("cl_object_names", "cl_hierarchy")
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S3method("cl_object_names", "cl_membership")
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S3method("cl_object_names", "cl_partition")
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S3method("cl_object_names", "cl_ultrametric")
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S3method("cl_object_names", "default")
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S3method("cl_object_names", "dist")
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S3method("cl_object_names", "hclust")
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S3method("cl_object_names", "mona")
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S3method("cl_object_names", "phylo")
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S3method("cl_object_names", "twins")
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S3method("cl_predict", "Mclust")
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S3method("cl_predict", "Weka_clusterer")
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S3method("cl_predict", "bclust")
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S3method("cl_predict", "cclust")
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S3method("cl_predict", "cl_partition")
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S3method("cl_predict", "ccfkms")
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S3method("cl_predict", "clara")
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S3method("cl_predict", "cshell")
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S3method("cl_predict", "default")
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S3method("cl_predict", "fanny")
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S3method("cl_predict", "fclust")
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S3method("cl_predict", "flexmix")
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S3method("cl_predict", "kcca")
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S3method("cl_predict", "kmeans")
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S3method("cl_predict", "movMF")
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S3method("cl_predict", "pam")
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S3method("cl_predict", "pclust")
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S3method("cl_predict", "rock")
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S3method("cl_prototypes", "Mclust")
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S3method("cl_prototypes", "bclust")
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S3method("cl_prototypes", "ccfkms")
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S3method("cl_prototypes", "cclust")
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S3method("cl_prototypes", "cl_pam")
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S3method("cl_prototypes", "cl_partition")
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S3method("cl_prototypes", "clara")
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S3method("cl_prototypes", "cshell")
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S3method("cl_prototypes", "fclust")
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S3method("cl_prototypes", "kcca")
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S3method("cl_prototypes", "kmeans")
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S3method("cl_prototypes", "pam")
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S3method("cl_prototypes", "pclust")
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S3method("cl_prototypes", "specc")
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S3method("cl_validity", "agnes")
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S3method("cl_validity", "default")
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S3method("cl_validity", "diana")
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S3method("cl_validity", "cl_partition")
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S3method("cl_validity", "pclust")
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S3method("cophenetic", "cl_ultrametric")
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S3method("cophenetic", "mona")
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S3method("cut", "cl_dendrogram")
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S3method("is.cl_dendrogram", "cl_dendrogram")
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S3method("is.cl_dendrogram", "default")
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S3method("is.cl_dendrogram", "hclust")
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S3method("is.cl_dendrogram", "mona")
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S3method("is.cl_dendrogram", "phylo")
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S3method("is.cl_dendrogram", "twins")
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S3method("is.cl_hard_partition", "Mclust")
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S3method("is.cl_hard_partition", "Weka_clusterer")
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S3method("is.cl_hard_partition", "bclust")
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S3method("is.cl_hard_partition", "ccfkms")
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S3method("is.cl_hard_partition", "cclust")
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S3method("is.cl_hard_partition", "cl_hard_partition")
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S3method("is.cl_hard_partition", "cl_partition")
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S3method("is.cl_hard_partition", "cshell")
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S3method("is.cl_hard_partition", "default")
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S3method("is.cl_hard_partition", "fanny")
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S3method("is.cl_hard_partition", "fclust")
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S3method("is.cl_hard_partition", "flexmix")
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S3method("is.cl_hard_partition", "kcca")
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S3method("is.cl_hard_partition", "kmeans")
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S3method("is.cl_hard_partition", "kmedoids")
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S3method("is.cl_hard_partition", "movMF")
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S3method("is.cl_hard_partition", "partition")
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S3method("is.cl_hard_partition", "pclust")
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S3method("is.cl_hard_partition", "rock")
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S3method("is.cl_hard_partition", "specc")
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S3method("is.cl_hierarchy", "cl_hierarchy")
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S3method("is.cl_hierarchy", "default")
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S3method("is.cl_hierarchy", "hclust")
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S3method("is.cl_hierarchy", "mona")
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S3method("is.cl_hierarchy", "phylo")
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S3method("is.cl_hierarchy", "twins")
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S3method("is.cl_partition", "Mclust")
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S3method("is.cl_partition", "Weka_clusterer")
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S3method("is.cl_partition", "bclust")
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S3method("is.cl_partition", "ccfkms")
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S3method("is.cl_partition", "cclust")
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S3method("is.cl_partition", "cl_partition")
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S3method("is.cl_partition", "cshell")
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S3method("is.cl_partition", "default")
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S3method("is.cl_partition", "fclust")
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S3method("is.cl_partition", "flexmix")
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S3method("is.cl_partition", "kcca")
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S3method("is.cl_partition", "kmeans")
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S3method("is.cl_partition", "kmedoids")
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S3method("is.cl_partition", "movMF")
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S3method("is.cl_partition", "partition")
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S3method("is.cl_partition", "pclust")
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S3method("is.cl_partition", "rock")
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S3method("is.cl_partition", "specc")
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S3method("n_of_classes", "Mclust")
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S3method("n_of_classes", "bclust")
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S3method("n_of_classes", "cclust")
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S3method("n_of_classes", "cl_membership")
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S3method("n_of_classes", "cl_partition")
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S3method("n_of_classes", "cshell")
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S3method("n_of_classes", "default")
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S3method("n_of_classes", "fanny")
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S3method("n_of_classes", "fclust")
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S3method("n_of_classes", "kmeans")
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S3method("n_of_classes", "partition")
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S3method("n_of_classes", "pclust")
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S3method("n_of_objects", "Mclust")
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S3method("n_of_objects", "bclust")
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S3method("n_of_objects", "cclust")
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S3method("n_of_objects", "cl_ensemble")
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S3method("n_of_objects", "cl_hierarchy")
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S3method("n_of_objects", "cl_membership")
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S3method("n_of_objects", "cl_partition")
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S3method("n_of_objects", "cl_ultrametric")
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S3method("n_of_objects", "cshell")
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S3method("n_of_objects", "default")
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S3method("n_of_objects", "dist")
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S3method("n_of_objects", "fclust")
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S3method("n_of_objects", "hclust")
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S3method("n_of_objects", "kmeans")
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S3method("n_of_objects", "mona")
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S3method("n_of_objects", "partition")
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S3method("n_of_objects", "pclust")
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S3method("n_of_objects", "phylo")
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S3method("n_of_objects", "twins")
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S3method("names", "cl_proximity")
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S3method("plot", "cl_addtree")
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S3method("plot", "cl_ensemble")
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S3method("plot", "cl_dendrogram")
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S3method("plot", "cl_ultrametric")
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S3method("print", "cl_class_ids")
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S3method("print", "cl_classes_of_partition_of_objects")
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S3method("print", "cl_classes_of_hierarchy_of_objects")
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S3method("print", "cl_cross_proximity")
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S3method("print", "cl_dendrogram")
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S3method("print", "cl_dendrogram_ensemble")
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S3method("print", "cl_ensemble")
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S3method("print", "cl_fuzziness")
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S3method("print", "cl_hierarchy")
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S3method("print", "cl_hierarchy_ensemble")
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S3method("print", "cl_membership")
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S3method("print", "cl_pam")
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S3method("print", "cl_partition")
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S3method("print", "cl_partition_by_class_ids")
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S3method("print", "cl_partition_by_memberships")
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S3method("print", "cl_partition_ensemble")
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S3method("print", "cl_proximity")
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S3method("print", "cl_pclust")
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S3method("print", "cl_validity")
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S3method("print", "kmedoids")
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S3method("print", "pclust")
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S3method("print", "solve_LSAP")
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S3method("rep", "cl_ensemble")
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S3method("silhouette", "cl_partition")
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S3method("silhouette", "cl_pclust")
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S3method("unique", "cl_ensemble")
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S3method(".maybe_is_proper_soft_partition", "Mclust")
|
||
|
|
S3method(".maybe_is_proper_soft_partition", "cl_partition")
|
||
|
|
S3method(".maybe_is_proper_soft_partition", "cshell")
|
||
|
|
S3method(".maybe_is_proper_soft_partition", "default")
|
||
|
|
S3method(".maybe_is_proper_soft_partition", "fanny")
|
||
|
|
S3method(".maybe_is_proper_soft_partition", "fclust")
|
||
|
|
S3method(".maybe_is_proper_soft_partition", "flexmix")
|
||
|
|
S3method(".maybe_is_proper_soft_partition", "pclust")
|