116 lines
3.5 KiB
Plaintext
116 lines
3.5 KiB
Plaintext
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circlize-package circlize-package
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$.CELL_META Subset.CELL_META
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add_transparency add_transparency
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adjacencyList2Matrix adjacencyList2Matrix
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adjacencyMatrix2List adjacencyMatrix2List
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arrange_links_evenly arrange_links_evenly
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calc_gap calc_gap
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CELL_META CELL_META
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chordDiagram chordDiagram
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chordDiagramFromDataFrame chordDiagramFromDataFrame
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chordDiagramFromMatrix chordDiagramFromMatrix
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circlize circlize
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circos.arrow circos.arrow
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circos.axis circos.axis
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circos.barplot circos.barplot
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circos.boxplot circos.boxplot
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circos.clear circos.clear
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circos.connect circos.connect
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circos.dendrogram circos.dendrogram
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circos.genomicAxis circos.genomicAxis
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circos.genomicDensity circos.genomicDensity
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circos.genomicHeatmap circos.genomicHeatmap
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circos.genomicIdeogram circos.genomicIdeogram
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circos.genomicInitialize circos.genomicInitialize
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circos.genomicLabels circos.genomicLabels
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circos.genomicLines circos.genomicLines
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circos.genomicLink circos.genomicLink
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circos.genomicPoints circos.genomicPoints
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circos.genomicPosTransformLines circos.genomicPosTransformLines
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circos.genomicRainfall circos.genomicRainfall
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circos.genomicRect circos.genomicRect
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circos.genomicText circos.genomicText
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circos.genomicTrack circos.genomicTrack
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circos.genomicTrackPlotRegion circos.genomicTrackPlotRegion
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circos.heatmap circos.heatmap
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circos.heatmap.initialize circos.heatmap.initialize
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circos.heatmap.link circos.heatmap.link
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circos.info circos.info
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circos.initialize circos.initialize
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circos.initializeCircularGenome circos.initializeCircularGenome
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circos.initializeWithIdeogram circos.initializeWithIdeogram
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circos.labels circos.labels
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circos.lines circos.lines
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circos.link circos.link
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circos.nested circos.nested
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circos.par circos.par
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circos.points circos.points
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circos.polygon circos.polygon
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circos.raster circos.raster
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circos.rect circos.rect
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circos.segments circos.segments
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circos.text circos.text
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circos.track circos.track
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circos.trackHist circos.trackHist
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circos.trackLines circos.trackLines
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circos.trackPlotRegion circos.trackPlotRegion
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circos.trackPoints circos.trackPoints
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circos.trackText circos.trackText
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circos.triangle circos.triangle
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circos.update circos.update
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circos.updatePlotRegion circos.updatePlotRegion
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circos.violin circos.violin
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circos.xaxis circos.xaxis
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circos.yaxis circos.yaxis
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cm_h cm_h
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cm_x cm_x
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cm_y cm_y
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col2value col2value
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colorRamp2 colorRamp2
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convert_height convert_height
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convert_length convert_length
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convert_x convert_x
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convert_y convert_y
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cytoband.col cytoband.col
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degree degree
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draw.sector draw.sector
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fontsize fontsize
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generateRandomBed generateRandomBed
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genomicDensity genomicDensity
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get.all.sector.index get.all.sector.index
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get.all.track.index get.all.track.index
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get.cell.meta.data get.cell.meta.data
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get.current.chromosome get.current.chromosome
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get.current.sector.index get.current.sector.index
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get.current.track.index get.current.track.index
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getI getI
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get_most_inside_radius get_most_inside_radius
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highlight.chromosome highlight.chromosome
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highlight.sector highlight.sector
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inches_h inches_h
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inches_x inches_x
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inches_y inches_y
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inch_h inch_h
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inch_x inch_x
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inch_y inch_y
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mm_h mm_h
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mm_x mm_x
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mm_y mm_y
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names.CELL_META names.CELL_META
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posTransform.default posTransform.default
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posTransform.text posTransform.text
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print.CELL_META print.CELL_META
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rainfallTransform rainfallTransform
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rand_color rand_color
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read.chromInfo read.chromInfo
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read.cytoband read.cytoband
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reverse.circlize reverse.circlize
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set.current.cell set.current.cell
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set_track_gap set_track_gap
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show.index show.index
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smartAlign smartAlign
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Subset.CELL_META Subset.CELL_META
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uh uh
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ux ux
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uy uy
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